Pseudomonas aeruginosa 3573, AJ60_05625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 3573 adTvP-supercont1.39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACAGCGAGGCGATCGTGGTGATGGCGCGGCCCGGTCACCCGCTGGCCCAGGCCGCCGCGCTGGACTGGGAAGACGTGCGGCGCTACGACTGGATCGTC TGGCCGCCCGGCTCGCCGATCCGCAGCAAGCTCGACATGGCCCTGACCCAGGGCGGCCGGCAGCCGCCGGCCTACCGCCTGGAGTCATCGTCGATGCTGG CCAACATCGAATTGTTGCGTGGCAGCGACATGCTATCCATCGGCTCGGCGCGGGTGGTCGAGCACCTTGCCGGGCTCGGCCTGGTGGCCAGGCTGGCGCT GGAGATTCCCGGCGAGGGCGCGGTGGGCATGTGCTGGCGCGACGAACCGCACCGCGACCGTGCCAGCGAAGACCTGCTGGCCTGCCTGCGCGAAGGCGCG GCGGCCGAGTAGGGCGCCGGCCGGCGGGTGCTATTGCAAAAAGGCCGCGGCTTCTCGACAATGCGATTCATTATCATTCATGTGTCGCCCCGACTTTCCC
DNA Sequence for Gene
>AJ60_05625
ATGTCCGCCCCGATCCTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAACTGGCTGCGCGGCAAGCTGG GCTGCGCGGCGGACGCGGCGGACCTGGCCCAGGACACCTTCCTGCGCATCCTGCTCAAGCGCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCG GACCATCGCCCGCGGCCTGGTGATCGACCACTGGCGTCGCGAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACCTGCCCGAGGCACAGGCGCCG TCGCCCGAGGCGCGGGAACTGGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCC AGTGCGAAGACCTCAGCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAGGCGCTGTACCACTGCTACCT GCTGCGCTACGGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGAGCCGTGGACGGGACGCGCGGTAGGGTCGACGAAGCGGTGGTCAGGCAGGCCATCCACTGGCTGGTCCGCCTGCGCTCGCAGCCGGGCGACGATCG CCTGCAGCGCGCCTGCGCGGCCTGGCGCGCGGAGCACGGCGAGCACGAGCGGGCCTGGCAGCAGGTCAGCGTGCTCAACGAAGAACTGCAAGGACGCTTC AAGGCGCTGCCCGGCGGGGTCGCCTACGGCACCCTGGACAGTAGCGCGCAGCGCCTGCAGCGGCGCCAGGCGCTGAAACTGCTGTCGCTGCTGGTGGCCG GCGGCGCCGTGGCCTGGGTCGGTCGCGACAGCCTGCCCTGGCAGCGCCTGAGCGCCGACTACAGCACCGCCACCGGCGAGCGACGCAGTATCGAGCTGGT CGACGGCACCCGCCTGCAACTGAACACCGACAGCGCGGTCGACGTGCGCTACGACGCCGGCCAGCGCCTGATCCTCCTCGCCCGCGGCGAGATCTTCCTC
Amino Acid Sequence
>RNA polymerase sigma factor
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAP SPEARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site