Pseudomonas aeruginosa 3573, AJ60_05068
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015628 | protein secretion by the type II secretion system |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01707
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0015627 | type II protein secretion system complex |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01707
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR02532 | JCVI: prepilin-type N-terminal cleavage/methylation domain | IPR012902 | Prokaryotic N-terminal methylation site | 8 | 30 | 1.2E-8 |
| SUPERFAMILY | SSF54523 | Pili subunits | IPR045584 | Pilin-like | 41 | 120 | 2.04E-13 |
| Pfam | PF07963 | Prokaryotic N-terminal methylation motif | IPR012902 | Prokaryotic N-terminal methylation site | 6 | 29 | 1.8E-9 |
| Gene3D | G3DSA:3.30.1300.30 | - | - | - | 38 | 120 | 1.1E-9 |
| NCBIfam | TIGR01707 | JCVI: type II secretion system minor pseudopilin GspI | IPR010052 | Type II secretion system protein GspI | 9 | 107 | 4.0E-36 |
| PANTHER | PTHR38779 | TYPE II SECRETION SYSTEM PROTEIN I-RELATED | IPR010052 | Type II secretion system protein GspI | 1 | 120 | 1.3E-23 |
| Pfam | PF02501 | Type II secretion system (T2SS), protein I | IPR003413 | Type II secretion system protein GspI, C-terminal | 43 | 120 | 1.6E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.