Pseudomonas aeruginosa 3573, AJ60_04861
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3573 adTvP-supercont1.23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCCGTTCGGTCCAGCCTGGATCGGTGAGGTCGCACTCCACCACGCGGACCCGCTCGGCGAAACCGGCCAGCGCCGTACGCGCGATCTCCAGCAGCATG ACGTCGGCGTCCAGCGCCACCACCCGCGCCGCCGGGAAGCGTTCGAGCAGGCGCCGGCCGAGGGAGCCCGGGCCGCAGGCGGCGTCGATGGCGGTGAAGC GCCCGTCGCGGCCGAAGAGGTCTTCGAGCAACTGGAACATCGCCTCGTAGCGCTCCTCGCGCTGGCGGATGTAGCCCTCCTGCTGGCGGTCCCAGCGTTC GAGGAGCGCCATGATCTGCTCGGTTGCGGTCATCTTTCCTCCTGGGGGGCATGCCCGGTTGAGAGTGGGGTCCTGTGCTTCGAGGGATACGGCGAGCGAG ACGTTCCCTCGCCTCGATGAAGAAGAAACGGCGGGCATTCTTCATTCGAAGAAATGTTATGTTATAACTTATAAATATTCATAATTCATACCTGCCGACC
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| DNA Sequence for Gene |
>AJ60_04861
ATGACCCCCCATTCCTCCCCGCACCGTCTTCCTCCGCTGCGGCTGGCCCGCGCCGTGCCGTTCCTCTACCTGCTTCCCTGCCTGGCGCTGGCCGCGCCGG TCGAACTGGAGCCGACCGTGGTCAGCGCCACCACTACCGAGCGCAAGCTGCGCGACGCCCCGGCCAGCGTTTCGCTGATCGCCGCCGAGGACCTGCGGCG GCGCCCGGTGCGCGACCTGCAGGAAGCCCTGCGCGGTTCGGAAAGCCTGCAGTTCAACGGCGTCGGCATGTCCCGGCGGGGCATCAGCGTTCGCGGCATG TCCAGCGAGCACACCCTGGTGCTGGTGGACGGCCAGCGGATCTCCACCTCGTCCGGGGCCATCGCCCATTCCGACTTCGACCTCGGCTGGGTGCCGGTGG AGAGCATCGAGCGCATCGAGGTGGTACGCGGGCCGATGTCCTCGCTCTACGGTTCGGAAGCCCTCGGCGGGGTGGTGAACGTGATCACCCGGCGCGCCAC CGATACCTGGACGGGCAGCGGTCTGCTCGATGGCGGCGTGCGCGAGGACGGCCTCGGTGGGCAGAGCCACCAGCTCGGCGCCTATCTCGCCGGGCCGCTG GTGCCCGGCAAGCTGGGCCTCGCCCTGAACGGCGAGAGCCGCCGCCAGCAGGAAACCCCGGACGCCGACGAGCGCCGGCTCTCCGAGCTGGAAGGCGGCA ACGCCGACAGCGGCGGGCTGAACCTCAGCTGGACCCCGGACGACGCCCAGCGCATCGACCTCGGCCACCAGCGCGGGCGCGAACGACGCTGGCGCAACAG CGAGACCGGGGGGCCGCGCTCGCGCTACTACGAGTCGCGCGACGTGATCGAACGCGAGCGCTGGTCGCTCGCCCACAATGGCCAGTGGGACTGGGGCAGC AGCCAGCTGCGCACCTACCGCAACCGCCTGGAGCGGCACAACGCGCGTTCCGACGGACAACCGCCGAGCAACCCGCAGCGTCTCACCGACAGCGTGGTCG ACGGCCACCTCAGCGTGCCGGCCTTCGAGCGGCATCTCTTCACCCTCGGCGGCGAATGGCGCAAGGAAGAACTGGAGGATCGCTCGGTGAATACCGCCGG CGACGCCAGCGCGCGACACAAGGCGCTGTTCCTGCAGGACGAGATCGCCTTCGGCCCGGACTGGTCGCTGACCCTCGGCAGCCGCTTCGACAAGCACGAG GCGTTCGGCTGGGAAAGCAGTCCGCGCCTGTACCTGCTGCACCACCTTTCCGATGCGCTGACCCTGCGCGCCGGCGTCGGCCGCGGCTACAAGGCGCCGA GCCTGAAGCAGCTATCGCCGGAGTATGCGGCGGTCGGTGGCGGCGGGCGCTTCACCATCTACGGCAATCCCGACCTGAAGCCGGAGACCAATACGTCCTA CGAACTGGGCGCCGACTACCAGGGCGATGGCTGGTCGCTGAAGGGCACGGTGTTCGAGAACGATGTCCGCGACCTGATCCAGACCGTCTGCGTAGCGCGC TGCGGGGTGCGCGGCGGCGAGATACGCAACTACGAGAACGTCGACAGGGCACGGATCCGCGGCCTCGAGCTGGGCGGCGGCGTGGACCTGCCGGCGGACC TGCGCTGGGAACTCAACTACACCTACCTCGACGCGCGCAACCGCACCGCCGGCCAGCGCCTCGGCGATCGCTCCCGGCACCTCGCCAACAGCCAATTGCG CTGGAGCCCCAATGCCCGCTTCAGCGCCCAGTTGCGCACCGAATACGTCGGCAGCCAGGTGGCCTACAGCAGCAACGTCGGCTATGCCCTGCCGGCCTAC AGCCTGTGGCACCTGGAGCTGAGCCAGAAACTCAACGAGAACCTGACGCTGCGCGGCGGCATCGAGAACCTCGGCGACCAGCGCCTGGCCGACGACGACA CGCACTTCACCTACGCCGAACCTGGGCGCACCTTCCATCTCGGCCTGGTGGCGAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCCGTTCGCTACTCTTCTGCGGCGCGCTGCTGGCCAGTCTCTGTGCCTGGGCGGAGTCGGCCCAGGTGCGTCTGCTCAGCAGCGATTTCGTCCTCCC GGGCAAGCACCAGCGCCTAGCCGGTTGGGCGCGCGAGGCCGGTGTCGAGTTGCGCGGCCTGCGCCTCGGCATCGGCGAGGCGCCGCCCGGCGAGTGGCTG GACGGCGGCAACCTGCTGATCCTCGACACGCCGCGGCCGACCGATCGCGCCCAGGTCGAGGAGGCGCTGGGCGAGCGCTTGCAAGGCGGGACGCAACCCT GGATCCGCGTCGGCGGCGGTCCGCCGGGCTTCGGCAACCTGCCGGCGGCGCTGGGCGGGCGCCTGGTCGGCTACTACGCGAACGGCGGCGAAGCCAACCT GCGCCGGCTGTTCGAGGCGGTCCGACGCTGGCATGCCGGCCTGCCCGTCGACGCGTTGCCGGCGCCGCAGCCCCTGGCGCAGGCCGGCTTCTATCATCCC
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| Amino Acid Sequence |
>TonB-denpendent receptor
MTPHSSPHRLPPLRLARAVPFLYLLPCLALAAPVELEPTVVSATTTERKLRDAPASVSLIAAEDLRRRPVRDLQEALRGSESLQFNGVGMSRRGISVRGM SSEHTLVLVDGQRISTSSGAIAHSDFDLGWVPVESIERIEVVRGPMSSLYGSEALGGVVNVITRRATDTWTGSGLLDGGVREDGLGGQSHQLGAYLAGPL VPGKLGLALNGESRRQQETPDADERRLSELEGGNADSGGLNLSWTPDDAQRIDLGHQRGRERRWRNSETGGPRSRYYESRDVIERERWSLAHNGQWDWGS SQLRTYRNRLERHNARSDGQPPSNPQRLTDSVVDGHLSVPAFERHLFTLGGEWRKEELEDRSVNTAGDASARHKALFLQDEIAFGPDWSLTLGSRFDKHE AFGWESSPRLYLLHHLSDALTLRAGVGRGYKAPSLKQLSPEYAAVGGGGRFTIYGNPDLKPETNTSYELGADYQGDGWSLKGTVFENDVRDLIQTVCVAR CGVRGGEIRNYENVDRARIRGLELGGGVDLPADLRWELNYTYLDARNRTAGQRLGDRSRHLANSQLRWSPNARFSAQLRTEYVGSQVAYSSNVGYALPAY SLWHLELSQKLNENLTLRGGIENLGDQRLADDDTHFTYAEPGRTFHLGLVASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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