Pseudomonas aeruginosa 3573, AJ60_04499
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3573 adTvP-supercont1.19, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGTGTGTGCAGGGGCTAGAATTGGCAAGGAAGTTTCTCTAGGCCAAAATGTGTTTGTTGGAAATAAAGTATCCATTGGTGATCGATGTAAAATTCAGA ACAACGTATCTGTCTATGACAATGTTACTCTAGAGGAAGGGGTCTTTTGTGGACCGAGTATGGTATTTACAAATGTCCATAATCCACGTTCGCTAATTGA GCGAAAAAGTGAGTACCTGAATACACTGGTGAAACGTGGCGCTACCTTGGGAGCCAACTGCACCATTGTCTGTGGGGTAACTATCGGTTCCTTTGCTTTT GTTGGGGCTGGAGCTGTAGTCACGTCAGATGTGCCATCATATGCGTTGATGGTAGGTGTTCCCGCACGACAAGTTGGTTGGATGAGCGAGTACGGTGAAA GACTTGATTTGCCGGTGAATGGAAAAGGTAAGGCTACTTGTCCACATACTGGGGATACGTATCGACTGTCTGCAGATGGACTGGTGAAGGAGTTGGTGGC
|
|
| DNA Sequence for Gene |
>AJ60_04499
GTGATTGACTTTATTGACCTGCGGGCGCAGCAGGCACGTATTAAAGATAAGCTCGACCTCGCAATTGCCCGGGTACTTGAGCATGGACAATATATACTTG GTCCCGAGGTGGCTGAGTTAGAGCAAAAGCTGGCCGATTATGTCGGGGTTCGGCACTGTATCAGTGTAGCTAACGGGACAGATGCCCTGCAGATTGCGCT GATGGCATTGAATGTAGGGGCTGGCGATGAAGTTATTACCCCGGGATTCAATTATATAGCCACTGCGGAAACAGCTGCATTACTAGGGGCAACACCGGTT TATGTCGATGTTGACCCTCGCTCATATAATCTAGATCCAAAGCTGCTGAAAGCAGCTATCACAGCAAGAACTAAAGCGATTATTCCTGTATCGTTGTATG GGCAGTGTGCCGATTTTGACGAGATTAATGAGATTGCAGCGGAGTATGGTATCCCTGTTATTGAGGATGCTGCTCAGAGTTTTGGTGCAATCTATAAAGG AAGGCGCTCCTGTAGTTTGACTAAAATTGCATGCACCAGCTTTTTCCCTAGTAAACCATTGGGTTGTTACGGTGATGGTGGAGCAATTTTCACGGAAGAT GACGGCTTGGCCGAGGTTATGCGCCAAATAGCTCGACATGGCCAAGACCGTCGCTATCATCATATCCGGGTGGGAGTAAATAGCCGCCTTGATACCTTGC AGGCAGCTATCCTTCTTTCAAAGATGGAAGTTTTTGATGAGGAAATGCAGTTACGCCAAAGAGTAGCACAACGTTACAGTTCTTTATTGCAGGCTGCAGG GCTTGACTCTATGCCCTACATTGAGCCGTATAATGTTAGTGCTTGGGCTCAATATACTATTCGTGTGAATGAACGGTATAATGTTCAGAGCTATCTTAAA GATGCAGGTATCCCAACTGCTGTTCATTATCCTATCCCCCTGAATAAACAGCCGGCGGTTTCTAACGACAAAGCATATCTGCCAGTTGGGGATATGGTTG CAGAAGAGGTATTGAGTCTTCCAATGCACCCTTATCTCACTGACGAAGCAATTGAGACTATTGTTAAGGCTCTCGTCAAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGTATTCTCATACTTACAAATGCTTTCCCTTATTATCCTGGGGAGCAATTTATTGAAGATGAGATAGCATTTTGGGCTGAGAGCTCATTTTCCGAGGT GTATATTTTGCCCGCCACTTGCGGAAAAGATAGAAGATGGCTGCCTGAGAATATAACGCTCTCAACCCCGATTCAAGAAAAATCGAGATTGAATTTGATT TTTAGAGCGCTTATTTCCGCTGTCTTCATAAAAGAGATTCGATGTTTGATAAAAGCAAGGGAGTTCAGCTTTTTAAAATTATATTATGCATTAAAAGCGT CGGCATTGACCAAGTCATCTGAGTTGGCGTTGCGCCAATTCGTATCCAATAATGGAAAAATCGATGTCGTTTATTGTTATTGGAATGATGTACAAGCTTA CGCTTCTTGTTTGCTGAAGCAGGAAGGGTTAATCGGTAAAGTAATCTCTAGAGCTCATGGGTTCGATCTTTACGAAGAGCGACGCGCGCATGGCTATATG
|
|
| Amino Acid Sequence |
>hypothetical protein
MIDFIDLRAQQARIKDKLDLAIARVLEHGQYILGPEVAELEQKLADYVGVRHCISVANGTDALQIALMALNVGAGDEVITPGFNYIATAETAALLGATPV YVDVDPRSYNLDPKLLKAAITARTKAIIPVSLYGQCADFDEINEIAAEYGIPVIEDAAQSFGAIYKGRRSCSLTKIACTSFFPSKPLGCYGDGGAIFTED DGLAEVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLSKMEVFDEEMQLRQRVAQRYSSLLQAAGLDSMPYIEPYNVSAWAQYTIRVNERYNVQSYLK DAGIPTAVHYPIPLNKQPAVSNDKAYLPVGDMVAEEVLSLPMHPYLTDEAIETIVKALVK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|