Pseudomonas aeruginosa 3573, AJ60_02434

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01845	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02321	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0015562	efflux transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02321	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01845	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.20.1600.10	Outer membrane efflux proteins (OEP)	-	-	56	475	1.1E-130
Coils	Coil	Coil	-	-	202	222	-
NCBIfam	TIGR01845	JCVI: efflux transporter outer membrane subunit	IPR010131	RND efflux system, outer membrane lipoprotein, NodT	11	475	1.7E-128
SUPERFAMILY	SSF56954	Outer membrane efflux proteins (OEP)	-	-	2	478	9.29E-119
Pfam	PF02321	Outer membrane efflux protein	IPR003423	Outer membrane efflux protein	73	266	1.2E-28
Gene3D	G3DSA:2.20.200.10	Outer membrane efflux proteins (OEP)	-	-	102	364	1.1E-130
PANTHER	PTHR30203	OUTER MEMBRANE CATION EFFLUX PROTEIN	-	-	6	481	2.8E-108
Pfam	PF02321	Outer membrane efflux protein	IPR003423	Outer membrane efflux protein	292	473	1.9E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.