Pseudomonas aeruginosa 3573, AJ60_01822 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3573 adTvP-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCATCTGGCCGACCGCGAAGGCGATGGGATCGGCCTCGCTCATCAGGCCGATACCGCCGAAGAGCAGGGTGAGGATGAAGGTGATGGTCTGGATCACC ACGCTGTAGACCACGAAGGCGCCGATCAGGATGCCTTTGACGCCCTTGATCTTGGCCCAGGCTTCGCTGATCACGTCGCCGATGCGGAAGTCGTAGTCGC CGATGACCGGCGGCACCGCCTGGGTCGGTTGCAGGGCGCTGGCGGGGGTGGCGTAGGGATTGCTGGTGTCGTTCATGGTGCTGTCCTTGTCAGTGAAACG GGCATCCGTGCGAGCGGAATGCTAGCGAGGGCGAAGGGGACAACGCAAGGTTCGGATGGCAGATATGCGCACTGACGCGCCCTGGCGGGCCGTGCCTACG GCGCTTTCCGTGAGTTCGTTGGAAAACCTGGAAATCCCCGAAGTGGGTCGCGAGCTTCGCGGCAGTCACTGGTAGACTGCCCGGTGCCGCCAGAAAGGGA
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| DNA Sequence for Gene |
>AJ60_01822
|sbcB
ATGACCGTGAACGCGAGTATTTTTTGGTACGACTACGAAACCACCGGCATCGACCCTCGCCGCGACCGGCCGTTGCAGATCGCCGGGATCCGCACGGACG AGGCGCTGAACGAGATCGGCGAGCCGATGAACCTGTATTGCCGTCCCAGCGACGATATCCTGCCCCATCCTATGGCTTGCCTGATCACCGGCATCACTCC CCAGCGGCTGGCCGAGCGGGGGCTGTCCGAGGCCGACTTCATGACCCGGGTACACGCCCAGCTGGCGCAGCCGGCGACCTGCGTGGCCGGCTACAACTCC CTGCGCTTCGACGACGAAGTGACGCGCTACAGCCTGTACCGCAACTTCTTCGATCCCTACGCCCGCGAGTGGCAAGGCGGCAATAGCCGCTGGGACCTGA TCGACATGGTCCGTACCGCCTATGCCCTGCGCCCGGAGGGCATCCAGTGGCCGCAGCTGGACGGCCGGCTGTCGCTGAAGCTGGAAATGCTCACCGCGGC GAACGGCCTGGAGCATGGGCAGGCCCACGACGCGCTTTCCGATGTCCGCGCCACCATTGCCCTGGCCCGCCTGATCCGTCAGCGCCAGCCGCGCCTGTAC GATTACCTCTACCAGTTGCGCAGCAAGCACAAGGTGCTCGACCAGGTGCGCCTGTTGCAGCCGCTGGTGCATGTCTCCGGACGCTTTTCCGCGGAGCGCC ATTTCCTCTCGGTGGTCCTGCCGCTGGTCTGGCACCCGCGCAACCGCAATGCTCTGATCGTCTGCGACCTCTGCGCCGATCCCGCGCCGCTGCTGGAGTT GTCGGCCGAGGACTTGCGCAGGCGCCTGTATACGCGTCGCGACGAACTGGCCGAGGGCGAGTTGCCGGTGCCGCTGAAGCAGATCCAGGTCAACCGTTGC CCGGTGGTGGCGCCGCTGTCGGTATTGCGCGCCGAGGATCGCCAGCGAACCGGCATCGAACTCGAGGAGTGCCAGCGAAAAGCCGAGCTGTTGCGCCAGC ATCAAACCGTCTGGGCGGACAAACTGACAGCGCTATATGGCGAAGAAAGTTTCTCCGCCAGCGACGACCCCGAGCAACAGTTGTATGACGGATTTATTGG CGATCGGGATCGACGCCTTTGTGAACAGCTGCGCCTTGCCGAACCGGAGCAATTGGCCAAAGAACAATGGCCCTTCGACGATGCCCGTTTGCAGGAGTTG TTCTTTCGCTATCGTGCGCGAAATTTCCCGGAAACTTTAAATGTGGCCGAGCGCCAACAATGGGAAAGCTTCTGCCGCAATCGTTTGTCCCATGAAGAAT ACGGCGCACCGAATACTTTGCCGGCCTTCGAGGCGGCGCTGGAGGCTTGTCGGCAAGAGCAGGGCGGCACACTGCCGGCGGTACTTGCGGCCTGGCGCGA TTACGCCGCGGAACTGCGTCAACGCTATTCGCTGGAGACTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCGCAGGCAGAGGAGCCGATACAATCCGGCGGAAATGAAAAACGCCAGCACTGGGCTGGCGTTCTTCGTGGAACTGACTGGTTTAGCCGAGCAGGGTG GCCCAGCTCTCGACGGCCTCGGGGCCCCACTTGGCTTTCCACTCTTTCAAAGTCTTGTGGTTGCCGCCCTTGGTCTCGATGACTTCGCCGGTGTGCGGGT TCTTGTACTGCTTGACCTTGCGCGCGCGCTTGCCGGCAGGTGCCTTGGCGGTGCGGGTGCTCTTGCCGATCTTGGCGTCCGGATCGAGCAGGGAAATCAC GTCACGCAGGGACTTCTGGTAAGTGCCCATCAGCGTGCGCAGCTTCTCTTCGAATTCCAGTTCTTTTTTCAGTTTGTCGTCTTGTTCCAGGGACTTCAGG CGCTCCTGAAGTTCCTTGATGGCTTCTTCCGTGGCGCGATATTCGTTGATCAGGGACATGTCAGGTACCTTGTCTGTGCTGAGTGGCGGTGGCGGGCATG
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| Amino Acid Sequence |
>exonuclease I
MTVNASIFWYDYETTGIDPRRDRPLQIAGIRTDEALNEIGEPMNLYCRPSDDILPHPMACLITGITPQRLAERGLSEADFMTRVHAQLAQPATCVAGYNS LRFDDEVTRYSLYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWPQLDGRLSLKLEMLTAANGLEHGQAHDALSDVRATIALARLIRQRQPRLY DYLYQLRSKHKVLDQVRLLQPLVHVSGRFSAERHFLSVVLPLVWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGELPVPLKQIQVNRC PVVAPLSVLRAEDRQRTGIELEECQRKAELLRQHQTVWADKLTALYGEESFSASDDPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPAVLAAWRDYAAELRQRYSLET
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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