Pseudomonas putida HB3267, B479_04450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52794
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022877 protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00829
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52794
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02378
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005351 carbohydrate:proton symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02060 Phosphotransferase system (PTS) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 3 98 3.03291E-28
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 2 101 2.79E-25
Gene3D G3DSA:3.40.50.2300 - - - 111 218 1.6E-38
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 122 203 2.2E-18
NCBIfam TIGR00829 JCVI: fructose PTS transporter subunit IIB IPR003353 Phosphotransferase system, fructose-specific IIB subunit 121 204 2.5E-33
Gene3D G3DSA:3.40.50.2300 - - - 1 101 5.3E-23
FunFam G3DSA:3.40.50.2300:FF:000014 PTS system fructose-like transporter subunit IIB - - 115 220 6.5E-36
PANTHER PTHR30505 FRUCTOSE-LIKE PERMEASE - - 116 570 0.0
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 5 88 8.9E-10
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 120 215 2.8015E-24
Pfam PF02378 Phosphotransferase system, EIIC IPR003352 Phosphotransferase system, EIIC 246 509 1.1E-16
NCBIfam TIGR01427 JCVI: fructose-specific PTS transporter subunit EIIC IPR006327 Phosphotransferase system, fructose IIC component 229 565 0.0
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 119 218 1.41E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.