Strain | Pseudomonas aeruginosa 3573 adTvP-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTTGCCGCGACGGGTGCAGTTTCTGCTGGGCGAAGCGGATGCGCCGCTTGGCGCCGCCTTCCAGGCGGTCGATGTCGTAGCCGAGGGCGCGCAGGCG GTCGCTGTAGACCAGGTGCTCGCGGCTGTGGTGGCCTTCCTGGCCGATGAAGCCACGGATCTGCTGCTTCAGCGCCGGGTCCTCGACCCGCTCGCGGTAG TGGCGCACGGAGTCGATGAAGAAGCGCTCGCCATCGGGGAACAGCACCGACATGGCGTTGAACATGTGGGTCTTGAAAGCGTCGCCGCTGTGCCAATGGC GCGGCATCGGATCGGGCAGGTCGAAGTCCAGATGACGCGGGCGGATCTCCAGACCTTCGGGGGTGGTGCTGGCCATAGCGGCTCCCTGTGATGGTGAAGG ACCATGGGATCGACTATCGCTTGCGGGGGATAGCCTCACAAGGTTATCTTCTGCCAACTTTCCGGTCATATCCGGCCAGCGGTCAGAACAATAAACAGCC
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DNA Sequence for Gene |
>AJ60_01400
ATGAAACAACCGCTCAATTTCACCGCCGAACTGGTGCCGGTGGCCTATGCCGAGGCACTCCTCGATCTTGTCGCGGAGTACGGCGTATCCCGCCAGGCGC TGTTCGACGCTGCGCAGGTGCGTCCCGAGGTGCTGGACAGCCCGAACGGCCGCCTGTCCTTCCTCGACTTCAACCAGCTCACCTACAGCGCCCAGGCCCT GTGCGGCGAGCCGGCGCTGGGGCTGGTGCTCGGCCAGCGCCTGAACGTCTCCGCCCACGGCATCCTCGGCTACGCGGTGCTGTCCAGCGCCAACCTGGGC AAGGCCATCCAGTTCGCCCTCAAGTACTACCGGGTGCTCGGCCTGGCCTACGAACTGGAGCTGGTGCTCGATGACGGTCGCGCCGAGTTGCGCGCGGTGG AGTCGATGCCGCTGGGCGCCGCTTCGGTGTTCGCCGCCGAGGGCCTGATGGCGACGCTGTATTCCATCGCCTGCTTCCTGGTCGGCGAGCCGTTGCAGGA CGTGCGGGTCGGCTTCGCCTATCCGCCGCCGGCCCATGCCCGGCGCTACGCCGAGGTGTTCGGGGTGGCTGCGGAGTTCGAGCAGCCCTGGCACTGGCTG AGCATGCCCAGCGAGTACCTGGAACGACCGATGGCGCTGGCCAACCCGGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAGGCGCTGCTGGCCACCCTGG ACGTCCAGGAAGGCCTGCTGACCCGTGTGCGCCGCCTGCTGCTGGCGCGTCCCGGCGACTTCCCCGACCTCGAACAGGCCGCCCGCGAACTGCACACCAG CGGGCGCAGCCTGCGCCGGCACCTGTCGTCGCTGGGCACCACCTACCAGCAGGTCCTCGACGATGTGCGCAAGCGCCTGGCCCTGCAATACCTGACCACC ACCCAGCTACCGCTGTACGAGATCGCCCTGCTGCTCGGCTTCAACGATTCGTCGAACTTCCGCCGGGCGTTTCGCAAGTGGACCGGCAAGCTGCCCAGCG ACTACCGCGAAGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGACGCCGGCGATCCTCGGCAGCGGATGGATGTGCCATGCTTGGCGTTTCATAGAAATCCATGGCGCGCTTGCCGCGCCGACCGTGATCGGAGTCTTG CATGTCGACATCCCCCGCGCTGATCCGCGAAACCTTTCCCGTCGGGCCTTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCATC GTCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAGGTGGTCAGCATCATCCATACCCACGCGCATCTGGATC ACTTCCTAGCCTCCGGCGAGATGAAGAAGCGCACCGGCGCCAGCCTGCACCTGCACAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGCCA ACTGTTCGGCGTGCCCTACACGCCGGTGCCGGCCCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGCCG
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Amino Acid Sequence |
>AraC family transcriptional regulator
MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAAQVRPEVLDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLG KAIQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFLVGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWL SMPSEYLERPMALANPATVQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLSSLGTTYQQVLDDVRKRLALQYLTT TQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSDYREAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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