Pseudomonas putida HB3267, B479_02420 (dnaG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida HB3267, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGAGAACGAACCCTTCGACGTAGCTCTGCGTCGTTTCAAGCGCTCCTGCGAAAAAGCCGGTGTACTGGCTGAAGTTCGTAGCCGCGAGTTTTACGAGAA GCCGACCGCCGAGCGTAAGCGCAAAGCAGCTGCTGCTGTTAAGCGTCACGCCAAGAAAGTTCAGCGCGAACAGCGCCGCGCCGTTCGTCTGTACTAATAC AGGCGTTCTACGCAAAGCTTCTGCCCTGCCCGGCTAACCGCCGGGCGATGGCAGTGGTCGTTTCAAACTTGAGCAGCTAGCTCAAGGCCCTGCACAAGCT TCATGCGAACTGCACATGGGCAACCTGCCTGAAACGTCAGAGCTGGTCCTCCTTGTTGTATGACCAGACGTGCACGTCCGACTGACGAGCCCTCAGGGGC TGGCGACGAGCACACATTCCCTCGCACTTTCCCAAGCGGCACTCGCCCCATTCGGCGCGTGAGCGATTAGACTTGCCAGCTGCCAGATGACGAGACTGCC
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| DNA Sequence for Gene |
>B479_02420
|dnaG
ATGGCCGGGCTGATTCCCCAGAGTTTCATTGACGACCTTATCAACCGCCTCGACATCGTCGACGTGGTGAGTTCGCGCGTCCAGCTGAAAAAAACCGGCA AGAACTATTCCGCCTGCTGCCCGTTCCACAAGGAAAAAACCCCTTCCTTCACGGTCAGCCCCGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCCGG CGGCAACGCCCTGGGCTTCGTCATGGACCACGACAACCTGGACTTCCCCCAGGCGGTCGAGGAGCTGGCCCGCGCCGCCGGCATGGAAGTACCCCGCGAG CAAGGTCGCCGCGACCACAAGCCGCGCCAGCCAACCGATTCGCCGCTGTACCCGCTGCTGGACGCCGCCTCGGAGTTCTACCGCCAGGCCCTGCGCAGCC ACCCGACCCGCAAGGCAGCGGTGGATTACCTCAAGGGCCGCGGCCTGTCCGGGGAAATCGCCCGTGACTTCGGCCTGGGCTTCGCCCCGCCAGGCTGGGA TAACCTGCTCAAGCACCTGGGTGCCGACACCTTGCAGCAGAAGGTGATGATCGATGCCGGCCTGTTGATCGAAAACGCCGAAAGCGGCAAGCGCTACGAC CGTTTCCGCGACCGGGTGATGTTCCCGATCCGCGACAGCCGCGGACGCATCATCGCCTTTGGTGGCCGAGTGCTCGGCGACGACAAGCCCAAGTATCTGA ACTCCCCGGAAACCCCGGTGTTCCACAAGGGCCAGGAACTCTACGGCCTGTACGAGGCACGCAAGCACAACCGCAACCTCGACGAAATCATCGTCGTCGA GGGCTACATGGACGTCATTGCCCTGGCCCAGCAGGGCCTGCGCAACGCCGTGGCCACCCTCGGCACCGCCACCAGCGAAGAGCACCTCAAGCGCCTGTTC CGCGTGGTACCCAGCGTGCTGTTCTGCTTCGACGGTGACCAGGCCGGGCGCAAGGCCGCCTGGCGCGCCCTGGAGTCGACCCTGTCGAACCTGCAGGACG GCCGCCGCGCGCGCTTCCTGTTCCTGCCCGAAGGCGAAGACCCGGACAGCCTGGTGCGCGCCGAAGGCACCGACGCCTTCATGGCCCGCATCAACCAGCA CGCCCAGCCGCTGGCCGATTACTTCTTCGAGCAGCTAAGCGTCGAAGCCGACCCGCGCTCGCTGGAAGGCAAGGCGCACATGGCGACCCTTGCCGCACCG CTGATCGAAAAGATCCCCGGCGCCAACCTGCGCCAGCTGATGCGCAACCGCCTTAAGGAAATCACCGGCCTCGACCCGCAGCAGGTCGAGCAACTGGCGC AACACGCCCCGGCCACCAGCAGCGTGCCGGACTACGACCCTGGCTACGACTATGACGCCATGGCCAGCTATACCCCCGATTACGGCGACATGCCGCAGCA CGACTTCGCCCCCGTTCATCAGGAACAGGAGTGGAAGCCGAACAAGGGCGCTGGCAAGAAGCAGTGGGGCGACAAACCCTGGGACAAGAACCGCAAGGGT GGCAAGCCATGGCAGCAGCGTGACGAAGCACCACCACGCGTACCGGCCCCGGTCGAGCCACCCACCCTGGCCGCCCTGCGCACGTTGCTGCACCACCCTC TGCTGGCCGGCAAGGTGGAAGATGCCAGCCACTTCGCCGATGAAGAACACTTGTACAGCCAGCTGCTGGTGGCACTGATCGAAGCCGCGCAGAAAAATCC TGGGCTAAGCTCAATGCAGTTGATCGCACGTTGGCACGGCACCGAACAGGGGCGCCTGCTGCGGGCCCTGGCGGAAAAGGAATGGCTGATCGTGGCCGAC AACCTTGAACAACAGTTTTTCGACACTATAACTAGCTTGTCCGCCCGCCAACGCGAGCGCAGCCTGGAACAACTGCTCAGGAAATCACGTCAAAGCGAAT TGACCAGCGAGGAAAAAACCCAGCTCCTCGCCCTGCTGAGCCGGAATGTTCCCGCACAAACGCCGACCTCATCTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCATGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATCACCCGCGGTCGTGAGCAGGGCTACCTGACTTACGCGGAGGTCAACGACCACCTGCCTGAGGATATTTCAGATCCGGAACAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGAGTGCTCCGGATGCGGATGCCCTTCTGTTGGCGGAAGCCGACACCGACGAAGCCGC GGCCGAAGAAGCCGCTGCTGCGTTGGCGGCAGTTGAAACCGATATCGGCCGCACGACCGACCCGGTGCGCATGTACATGCGCGAAATGGGCACCGTCGAG CTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGTATCGAGGAAGGCATCCGTGAAGTCATGGGCGCCATCGCTCACTTCCCGGGCACTGTCGACT
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPRE QGRRDHKPRQPTDSPLYPLLDAASEFYRQALRSHPTRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQKVMIDAGLLIENAESGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAFMARINQHAQPLADYFFEQLSVEADPRSLEGKAHMATLAAP LIEKIPGANLRQLMRNRLKEITGLDPQQVEQLAQHAPATSSVPDYDPGYDYDAMASYTPDYGDMPQHDFAPVHQEQEWKPNKGAGKKQWGDKPWDKNRKG GKPWQQRDEAPPRVPAPVEPPTLAALRTLLHHPLLAGKVEDASHFADEEHLYSQLLVALIEAAQKNPGLSSMQLIARWHGTEQGRLLRALAEKEWLIVAD NLEQQFFDTITSLSARQRERSLEQLLRKSRQSELTSEEKTQLLALLSRNVPAQTPTSSGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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