Pseudomonas aeruginosa PS75, V562_05590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PS75 adTyT-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGCCGGGCTTCAAGGACTACCAGGCGCAGGTGATCCGCAACGCCAAGGCGATGGCCGAGGTGTTCATCGGGCGCGGCTACGACGTGGTTTCCGGCGGC ACCGACAACCACCTGATGCTGATCAGCCTGGTGCGCCAGGGCCTGACCGGCAAGGAAGCCGACGCCGCCCTCGGCCGGGTCGGCATCACGGTGAACAAGA ACGCCGTGCCGAACGATCCGCAGAGCCCGTTCGTCACCTCCGGCATCCGCATCGGCACCCCGGCCATCACCACCCGCGGGCTGCAGGAAGCGCAGAGCCG CGAACTGGCCGGCTGGATCTGCGACATCCTCGACCACCTCGGCGATGCCGACGTGGAGGCCAAGGTCGCCACCCAGGTCGCCGGTCTCTGCGCGGACTTC CCGGTCTATCGCTGAGCCCCCCGAAGACGGTCGGGGAGCCCGACGCGCCCCGGCCCAACCCTCTCCGCGGGAGAGGGAGCAACAGTTCAGGAGCATCCAC
|
|
| DNA Sequence for Gene |
>V562_05590
ATGCAACGCTACTCCGGCTTCGGCCTGTTAAAGCATTCACTGAGCCATCACGAGAACTGGCAACGCATGTGGCGCACGCCCACGCCGAAGCCGGTCTACG ACGTGGTCATCGTCGGCGGCGGCGGGCACGGCCTGGCCACCGCCTACTACCTGGCCAAGGAACACGGCATCAGCAACGTGGCGGTAGTCGAGAAAGGTTG GCTGGGCGGCGGCAACACCGCGCGCAACACCACCATCGTGCGCTCCAACTACCTGTGGGACGAGTCCGCGCTGCTCTACGAACACGCGATGAAGCTGTGG GAGGGCCTGTCCCAGGACCTCAACTACAACGTGATGTTCTCCCAGCGCGGGGTCTACAACCTCTGCCACACCCTCCAGGACATGCGCGACGGCGAGCGCC GGGTCAGCGCCAACCGCCTCAACGGCGTCGACGGCGAATTGTTGAACGCGCAGCAGGTGGCGGAGGAGATTCCCTACCTGGACTGCAGCAAGAACACCCG CTACCCGATCATGGGCGCGACCATCCAGCGTCGCGGCGGCGTCGCCCGCCATGACGCGGTGGCCTGGGGCTTCGCCCGCGCCGCCGATGCCCTCGGCGTG GACCTGATCCAGCAGACCGAAGTCACCGGCTTCCGCAAGCAGGACGGCGCGGTGATCGGCGTCGAGACCAACCGCGGCTTCATCGGCGCGCGCCGTGTCG GAGTGGTCACCGCCGGCAACTCCGGGCACATGGCCAGGCTCGCCGGCTTCCGCCTGCCGCTGGAGTCGCACCCGTTGCAGGCGCTGGTCTCCGAGCCGCT GAAGCCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCATGGCTACATCAGCCAGTCGGACAAGGGCGACCTGGTCATCGGCGCCGGCATCGACGGC TACAACGGCTACGGCCAGCGCGGCTCTTACCCGGTGATCGAGCACACCCTGCAAGCTATCGTCGAGATGTTCCCGGTGCTCTCGCGGGTACGCATGAACC GCCAGTGGGGCGGCATCGTCGACACCACCCCGGACGCCTGCCCGATCATCGGCAAGACTCCGGTGCAGAACCTGTTCTTCAACTGCGGCTGGGGCACCGG CGGCTTCAAGGCCACTCCCGGCTCCGGAAACGTCTTCGCCGCCACCCTGGCCAAGGGCGAACCGCATCCGTTGGCCGCGCCCTTCTCCATCGAACGCTTC CACAGCGGTGCGCTGATCGACGAGCACGGCGCGGCGGCAGTGGCGCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAAAAGCCGCCCGAAGGGCGAAATCCGCTGCCCCTCGCCCTTCAGGGAGAGGGTGCCGGTCAACCGGCAAGAACAGTTTCCGGAGGCTACAAAATGCTGA ATATCTTCTGCCCCCACTGCGGCGAACTGCGTTCCGAAGAGGAATTCCACGCCAAGGGTCAGGCCCACATCCCGCGCCCGCTCGACCCGAACGCCTGCAG CGACGAGGAATGGGGCGACTACATGTTCTTCCGCGACAACCCGCGCGGCCTCCATCACGAGCTGTGGGTGCACGCCGCCGGCTGCCGCAAGTACTTCAAC GTCACCCGACATACGGTGACCTACGAGATCCTCGAGACCTACCTGATCGGCGAGCAGCCCAGCGTCGTCGCCGACGGTGAGAAGAAAGCCGCCGTACAAG GGGAACCGGCATGAGCCAGATCAATCGCCTGTCCAGCGGCGGCCGCATCGACCGCAACCGCCCGCTGACCTTCAGCTTCAACGGCCAGCACTACCAGGGC
|
|
| Amino Acid Sequence |
>sarcosine oxidase subunit beta
MQRYSGFGLLKHSLSHHENWQRMWRTPTPKPVYDVVIVGGGGHGLATAYYLAKEHGISNVAVVEKGWLGGGNTARNTTIVRSNYLWDESALLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDMRDGERRVSANRLNGVDGELLNAQQVAEEIPYLDCSKNTRYPIMGATIQRRGGVARHDAVAWGFARAADALGV DLIQQTEVTGFRKQDGAVIGVETNRGFIGARRVGVVTAGNSGHMARLAGFRLPLESHPLQALVSEPLKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG YNGYGQRGSYPVIEHTLQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIIGKTPVQNLFFNCGWGTGGFKATPGSGNVFAATLAKGEPHPLAAPFSIERF HSGALIDEHGAAAVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|