Pseudomonas aeruginosa PS75, V562_04769
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PS75 adTyT-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCCGATCATCCCGCTGATCAACATGCGCGTGCTGGCCTGGCGCATTCCCAACGCCGAACTGCACGTGATCGACGACGGCCACCTGTTCCTGGTGACCCG CGCCGAATCGGTGGCGCCGATCATCATGAAGTTCCTCGCCGAGGAGCGCCGTCGCGCCATCATGCACCCTCGTCCGTTCCTGCCCAAGACCGGCTGAACT GCTGCACGGGCAACACCAGGGCAGCAGACACTGCTTCGTCATGGTGCAGGTGCATAGTCAATGTTCCGCAACGGCGCATGGCGCCTGGCTTCGCCGCGAC AGCGCAAGCTCTGCGACGCCCCTCCCGGCGTTGTGGTACAGCGCTTGCTGCCCCACTGTCGGGCGGCATCCTCCCTGTTCAGGCAGGTGTGCGGTTCTGC CCCGGGTGAAACGGAATTCACAGGCTATAACTGAGTATTCCGAGCCAGGGGACGATCGCCCGTGGCATCCAGACTGTGGTCCTACGACGGAGTGTGGTCC
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| DNA Sequence for Gene |
>V562_04769
ATGCGAGAAAAGCAGGAATCGGGTAGCGTGCCGGTGCCCGCCGAGTTCATGAGTGCACAGAGCGCCATCGTCGGCCTGCGCGGCAAGGACCTGCTGACGA CGGTCCGCAGCCTGGCTGTCCACGGCCTGCGCCAGCCGCTGCACAGTGCGCGGCACCTGGTCGCCTTCGGAGGCCAGTTGGGCAAGGTGCTGCTGGGCGA CACCCTGCACCAGCCGAACCCACAGGACGCCCGCTTCCAGGATCCATCCTGGCGCCTCAATCCCTTCTACCGGCGCACCCTGCAGGCCTACCTGGCGTGG CAGAAGCAACTGCTCGCCTGGATCGACGAAAGCAACCTGGACTGCGACGATCGCGCCCGCGCCCGCTTCCTCGTCGCCTTGCTCTCCGACGCCGTGGCAC CCAGCAACAGCCTGATCAATCCACTGGCGGTAAAGGAACTGTTCAATACCGGCGGGATCAGCCTGCTCAATGGCGTCCGCCACCTGCTCGAAGACCTGGT GCACAACGGCGGCATGCCCAGCCAGGTGAACAAGACCGCCTTCGAGATCGGTCGCAACCTCGCCACCACGCAAGGCGCGGTGGTGTTCCGCAACGAGGTG CTGGAGCTGATCCAGTACAAGCCGCTGGGCGAGCGCCAGTACGCCAAGCCCCTGCTGATCGTGCCGCCGCAGATCAACAAGTACTACATCTTCGACCTGT CGCCGGAAAAGAGCTTCGTCCAGTACGCCCTGAAGAACAACCTGCAGGTCTTCGTCATCAGTTGGCGCAACCCCGACGCCCAGCACCGCGAATGGGGCCT GAGCACCTATGTCGAGGCCCTCGACCAGGCCATCGAGGTCAGCCGCGAGATCACCGGCAGCCGCAGCGTGAATCTGGCCGGCGCCTGCGCCGGCGGGCTC ACCGTGGCCGCCTTGCTCGGCCACCTGCAGGTGCGCCGGCAACTGCGCAAGGTCAGTAGCGTCACCTACCTGGTCAGCCTGCTCGACAGCCAGATGGAAA GCCCGGCGATGCTCTTCGCCGACGAGCAGACCCTGGAGAGCAGCAAGCGCCGCTCCTACCAGCATGGCGTGCTGGACGGGCGCGACATGGCCAAGGTGTT CGCCTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTCGGCAGGCAGCCGCCGGCGTTCGACATCCTCTACTGGAACAAC GACAACACGCGGCTGCCCGCGGCGTTCCACGGCGAACTGCTCGACCTGTTCAAGCACAACCCGCTGACCCGCCCGGGCGCGCTGGAGGTCAGCGGGACCG CGGTGGACCTGGGCAAGGTGGCGATCGACAGCTTCCACGTCGCCGGCATCACCGACCACATCACGCCCTGGGACGCGGTCTATCGCTCGGCCCTCCTGCT GGGCGGCCAGCGCCGCTTCATCCTGTCCAACAGCGGGCACATCCAGAGCATCCTCAACCCTCCCGGAAACCCCAAGGCCTGCTACTTCGAGAACGACAAG CTGAGCAGCGATCCACGCGCCTGGTACTACGACGCCAAGCGCGAAGAGGGCAGCTGGTGGCCGGTCTGGCTGGGCTGGCTGCAGGAGCGCTCGGGCGAGC TGGGCAACCCTGACTTCAACCTTGGCAGCGCCGCGCATCCGCCCCTCGAAGCGGCCCCGGGCACCTACGTGCATATACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGATCCGGCCCGGGCGCCTGGAGCCGGGCACCTCCATCCCCAGAAGAAGTCCGGATGAAGACACGCGACCGAATCCTCGAATGCTCGCTGTTGCTGTTC AACGAACAGGGCGAGCCCAACGTCTCGACACTGGAGATCGCCAACGAACTGGGCATCAGCCCGGGCAATCTCTACTACCACTTCCATGGCAAGGAACCGC TGGTGATGGCGCTGTTCGAGCGGTTCCAGGCCGAGTTGGCGCCGCTGCTCGATCCGCCCGAGGAGGTGCGCCTGGGCGCGGAGGACTACTGGCTGTTCCT GCACCTGATCGTCGAGCGCCTCGCCCACTACCGCTTCCTGTTCCAGGACCTGTCCAACCTGACCGGGCGCCTGCCACGGCTGGCTCGCGGCATCCGTACC TGGCTCGGCGCGCTGAAGCGGACCCTGGCCACCCTGCTGGCCCGCCTCAAGGCCGACCGGCAGTTGCGCAGCGACGCGCCGGCACTCGGCCAACTGGTCG
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MREKQESGSVPVPAEFMSAQSAIVGLRGKDLLTTVRSLAVHGLRQPLHSARHLVAFGGQLGKVLLGDTLHQPNPQDARFQDPSWRLNPFYRRTLQAYLAW QKQLLAWIDESNLDCDDRARARFLVALLSDAVAPSNSLINPLAVKELFNTGGISLLNGVRHLLEDLVHNGGMPSQVNKTAFEIGRNLATTQGAVVFRNEV LELIQYKPLGERQYAKPLLIVPPQINKYYIFDLSPEKSFVQYALKNNLQVFVISWRNPDAQHREWGLSTYVEALDQAIEVSREITGSRSVNLAGACAGGL TVAALLGHLQVRRQLRKVSSVTYLVSLLDSQMESPAMLFADEQTLESSKRRSYQHGVLDGRDMAKVFAWMRPNDLIWNYWVNNYLLGRQPPAFDILYWNN DNTRLPAAFHGELLDLFKHNPLTRPGALEVSGTAVDLGKVAIDSFHVAGITDHITPWDAVYRSALLLGGQRRFILSNSGHIQSILNPPGNPKACYFENDK LSSDPRAWYYDAKREEGSWWPVWLGWLQERSGELGNPDFNLGSAAHPPLEAAPGTYVHIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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