Pseudomonas aeruginosa BWH060, V561_06167
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH060 adTvY-supercont1.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGCCTCCCC TGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCGCCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGAAGCCGC CCGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCTACGCAACGTGATCGAACGCGCCAGCATCATCTGCAACCAGGAACGGGTGGAT GTCGACCACCTCGGTTTCAGCGCTGCGCAATCTGCCAGCAGCGCGCCGCGGATCGGCGAATCGCTGAGCCTGGAAGACCTGGAGAAAGCCCATATCACGG CGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCGGTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCTATGAGC
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| DNA Sequence for Gene |
>V561_06167
ATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGTTGCTCGGGTTGTTCAGCGTGA TGCAGCTCGGCCGCGCTCAGGAGCAACGGATGTCGCACCACCACGCGACCATCGAGGTGAGCCAGCAGTTGCGCCAGCTGCTCGGCGACCAGTTGGTCAT ACTGCTCCGCGAAAAACCCGACGGCCAGGCCCTGGAGCGCTCGCAGAACGATTTCCGACGGGTCCTGGAACAGGGTCGGGCGAATACCGTCGACGGCGCC GAGCAGGCCGCCCTGGATGGCGTTCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCGCTGCTCAAGGCGCCCATGGCCGACAACGACGGCTTCA GCGAAGCCTTCAATACCCTGCGCCTACGCCTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGACGCCGAGACCAGCGCCCGCCACCGAGCCTA CCTGGTCGCCGGCCTGCTTGGCCTGGTGGGCGTCGCCATCCTGCTGATCGGTTTCGTCACCGCCCACAGCATCGCCCGGCGCTTCGGCGCACCGATCGAA ACCCTGGCGCGGGCGGCGGACAGGATCGGCGAAGGCGATTTCGACATGACCCTGCCGATGACCAACGTCGCCGAGGTCGGCCAGTTGACCCGGCGTTTCG GCCTGATGGCCGAGGCCCTGCGGCAGTACCGCAAGACCAGCGTCGAAGAGGTGCTTTCCGGCGAGCGGCGCCTGCAGGCGGTACTCGACAGCATCGACGA CGGCCTGGTGATCTTCGACAACCAGGGACGCATCGAACACGCCAACCCGGTCGCGATCCGCCAGTTGTTCGTCTCCAACGACCCCCATGGCAAGCGGATC GACGAAATACTCAGCGATGTCGATGTCCAGGAGGCGGTGGAAAAGGCCCTGCTCGGCGAAGTCCAGGACGAGGCGATGCCCGACCTGGTGGTGGACGTCG CCGGCGAGTCGCGCCTGCTGGCCTGGTCGCTGTATCCGGTCACCCATCCCGGCGGGCATAGCGTCGGCGCGGTGCTGGTGGTCCGCGACGTGACCGAGCA GCGCGCCTTCGAACGGGTCCGCAGCGAATTCGTCCTGCGCGCCTCCCACGAACTGCGCACGCCGGTGACCGGCATGCAGATGGCCTTCAGCCTGCTCCGC GAACGCCTGGACTTCCCCGCGGAGTCACGGGAAGCGGACCTGATCCAGACGGTGGACGAAGAGATGTCGCGGCTGGTCCTGCTGATCAACGATCTGTTGA ACTTCTCGCGCTACCAGACCGGCATGCAGAAGCTCGAACTGGCGTCCTGCGACCTCGTCGACCTGCTCACCCAAGCGCAGCAGCGTTTCATTCCCAAGGG CGAGGCCCGCCGGGTCTCGCTGCAACTGGAGCTGGGCGATGAGCTGCCGCGCCTGCAGCTCGATCGCCTGCAGATCGAGCGGGTGATCGACAACCTGCTG GAAAACGCCCTGCGCCATAGCAGCGAAGGCGGGCAGATCCACCTGCAGGCCCGGCGCCAGGGCGACCGGGTGCTGATCGCGGTGGAAGACAATGGCGAAG GCATTCCCTTCAGCCAGCAAGGACGGATCTTCGAGCCTTTCGTCCAGGTCGGACGCAAGAAGGGCGGCGCCGGCCTCGGCCTGGCGCTGTGCAAGGAAAT CATCCAGCTGCATGGCGGGCGCATCGCGGTGCGCTCGCAACCGGGCCAGGGCGCGCGCTTCTACATGCTGCTGCCGGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCTCCCGGCAGGCTTTTCCACAGGCCTCAGGAAGTCGGCACCGCCAGCAGCAGGGCGGCGGTTTCCAGATCCGGCTCGCCATCGAAGCGGGCCGGACG GTACTTCATCTGGAAAGCGCCGATGACGTCGCGGGTGTCCTTCTCCAGCTCGCCGGTCTGCGGCACCAGGTAACCGTGCCGCGCCAACTGCTGCTGGAAC CAGCGCACATCCGGCAGCTGGCCGTTCAGTTCGGCGAGCCGTCGCGCCAATTCGCCGGGCTTCGGCCAGGGCACCAGACCGGCGTCGGCGAGGCGCTTCC AGGGGAACAGCGGACCTGGATCGACCTTGCGGCCCGGCGCGATATCGCTGTGTCCGATGATCCGGTCCGGGGTGATGCCGTGGCGCTTGGCGATGTCCTT CAGCAGGGGGATCAGCGCCTGGATCTGCGCTTCGCTGAACGGATACCAGACCCGCCCCTGGGGTGTATCGCGATAGCCCTGGTTGACGATCTCGATGCCG
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| Amino Acid Sequence |
>histidine kinase
MPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQRMSHHHATIEVSQQLRQLLGDQLVILLREKPDGQALERSQNDFRRVLEQGRANTVDGA EQAALDGVRDAYLQLQAHTPALLKAPMADNDGFSEAFNTLRLRLQDLQQLALAGISDAETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAPIE TLARAADRIGEGDFDMTLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQGRIEHANPVAIRQLFVSNDPHGKRI DEILSDVDVQEAVEKALLGEVQDEAMPDLVVDVAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVTGMQMAFSLLR ERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELASCDLVDLLTQAQQRFIPKGEARRVSLQLELGDELPRLQLDRLQIERVIDNLL ENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALCKEIIQLHGGRIAVRSQPGQGARFYMLLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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