Pseudomonas aeruginosa BWH060, V561_05041
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH060 adTvY-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAGGAAAGGGCGTCGGAAGACGCCTTTTTCATATCCGGGTACTATGCTCAGCTCTGCCGCCTCCTCCGCAGGTTCCGAGGGACTCGATGGATAATCAAC GACAATACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGTCACCCGTTATTTGGCGAGCTGATGGCGCAGACACGCGACCTCTCCGACACCGGGGT CTATGTCAAACACCCGGATCTGACCCAGCTCCCAACAGGCAGTGTCGTTACTGGCCAGGTACAGGATCTGCCGATCGACGCGCCGATCCTGCAGATGGAA GTCGTGCGAGTCGATGCGGAAGGCGTCGGCCTGCGCTTTCTCAGCGAAGCCTGAACGGTGATGTTCCACGTGGAACCCCAGGCATGAGCCACTGATCACA GAGTGGGCGAAACCGCTGCCGGTTATCGGCTAGAATGCGCGCCGCTCGGCATGGTGCCGGGCATGGGTTCCCTCACCCCATCGCGCAAAAAGGACAGTAT
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| DNA Sequence for Gene |
>V561_05041
ATGTCAGCTTCTTCTCCGGCGGCCTGGCGCGGCACCCTGGCCGGCCTGATCGCCTTCCACATCTTCATCATCATCGCCAGCAACTACCTGGTGCAGTTGC CGATCACCCTGTTTGGCTGGCACACCACCTGGGGCGCCTTCAGCTTTCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGCTTGCTGGGCAAGGGCCC TGCCCGGCTGGTCATCGCCCGGGTCATGATCCCGGCGTTGATCGCCTCCTACGTGGTCTCGGTGTTGTTCCAGGAAGCGGCGTTCCGTGGTTTCTCCGCG CTGCTGGAGTTCAACACCTTCGTCGCACGGATATCCCTGGCAAGCTTCCTCGCCTATGTGCTCGGGCAGATCCTCGACATCCAGGTATTCGACCGCCTCC GTCGTTCCCGGCACTGGTGGACCGCGCCAGTCGCCTCGACCATCCTCGGCAACCTGCTGGACACCTTCACCTTCTTCTTCGTGGCGTTCTGGCGCAGCGA CAATCCGTTCATGGCGCAGCACTGGGTGGAAATCGCCACGGTGGACTACGGAGTGAAGCTGAGTATCAGTCTTCTGCTGTTCGTGCCGCTCTACGGCATG CTACTCAACGGCATCCTGAAGATGCTGCCGGGGCGGCCGCAGAGCAACGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTCATCGAGGCAGTCTGGAGGAAGGGCGCAACGGCCGTGACCGTTGCGCCCTTCTTCGTTAGGAGGTGGTAGCCCGGTGCGCGGCCGTGAGCAGCGTC AGGGCATCGCCGCCGAGCGTGACCAGGATGTGCGCCACGCGCTGAATGGGAACGCCCTGCCCTGTCCGCACTTCGATCCTTTCCAAGGCATGGAGGAGGC CGAGGAGAGCCCTGAGGCGCTCCTGTACGGATTCGAGCATCTCATTGGCGGAGGCGTTCCGGTGAACGTAGAGAATCGCTTGCTCGTATGGGTATTCTAC ATAGGACGGGACTGAACGCTCGTGCTTCGACATGTTGGCTCCGGAAAAGTAGTTGAAGTCGGGTGTCGCGTTCGGGCTTGGACCGAAGCGATGAGTCGAA GCTAGAGGGCCGGCAGCGGTCGCTCAATGGGGTGTTGGGCGTTCGGGATGCAGGCTACATCGTTGACAGAAGTTGCCTACGAATGTGTGGAACAGGTCTT
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| Amino Acid Sequence |
>membrane protein
MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSA LLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGM LLNGILKMLPGRPQSNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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