Strain | Pseudomonas aeruginosa BWH060 adTvY-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCCAGGTCAGCGGGGTCGGCGCGCGCAAGCTGGAGCGCTACGGCCAGGCCTTCCTCGATGTCCTCACCGACTCGCCGGCGGCGCCCGCCGCGCCGCCG CAGGACCTGCGCCACGAATTGGCCAGCCTGGCCTGTGCGGGGATGACCCCGGCGCAGATAGCCCGCCAGCTCAATTGCAGCGAGAAGAACGTCTACGCGA TGCTCGCCGAGGCCATCGCCGGCCAGCAGGTGAGCCTGGAGCAGGCGCTGGATCTGCCCGAGGAACTCCTCGGCGAAATCCAGGACGCCTTCCTCGAGGA AGACGGCGAACTGCCGCCGGTGGCGGCGCTGGAGGAGCGTTTCGGCAAGCGGGTGCCGAGTGGCGTGCTGCACTGCGTGCGCGCCGCCCTGCAGGTGGAA CTGGAGTCGTGATATGGCCATTTGCCGGTATTTTCTGACGCCAATCTTGTGACGTCCTTCGCAAGCGTCTACTGTGACGCCAAGCCCTCCAAGAGAAGAG
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DNA Sequence for Gene |
>V561_02861
GTGTGCGTGACACAGAAGGACCGGTTGGACGACTCCCGTTCCAACCTCTATGCCGACCAATTGAACCGCGGTTTCCGCGGTCTGCGTTTCCTTCCCGAAC TGGAGCGTGACTACCGGCGCTACATGCTGGAGGACAGCTTCGCGCTGAAACGCATCGCCCTCAGCGTCGGCATGCTCGTCTGGCTGGCGTTCATCGGCAT CGACCTGCTGATCCTCGCTGGTCCCCCGCTGTGGGGCGTACTGGCGGTGCGCCTTGGCGTGCTGGTCCTGCTACTGGTCTGCGGCTGCCTGATCATGCTG CGCCGGCACATCCAGTTGATGGTGCCGCTGAGCATCGCCTGCGTCCTCGCCCTTGGCGTCGGTGCGGCGGCGGTGGTCGGCCTGGCGCACCGGGCGGATC CAGGTTATCCCTACGAAGGCCTGCTGCTGGTCAGTTTCGCCGCCTATTTCCTCGCCGGCCTGCGGTTGTCGCAGGCATTGAGCTGTGCGTTGGTCGTGCT GCTCGCCTACCTGGGTTTCGAGTGGTGGGCGGGTACCCAGGAGCCGCTGGGCAACAACCTGCTGTTCCTGCTGTTCGGCAACCTGATCGGCGCGGTCGGC TGCTACCTGCTGGAGTTCAAGTCGCGCGAGCATTTCCTCATCAGCCGCCTGTTGCGGGTGATGGCCGACCACGACAGCCTGACCGGCCTGCACAACCGGC GCAGCTTCAACCAGCACCTGGACCGCCTCTGGCGCCAGGCCCAGCGCGAACAGAAGATCCTGGCGCTGCTGCTTTGCGACGTCGACCATTTCAAGGCCTA TAACGACCGCTACGGACACCAGGCTGGCGATGCGGTCCTGCAGCGCATCGGCGCGGTGTTCGAGGCGAATGCCAGGCGTCCGCTGGACATGGCGGTGCGC CTGGGCGGCGAAGAGTTCGCCCTGTTGCTGTACGGCGCCAACGAGCACGAGGCGAGGCTGCGCGCGGAAGCGCTGCGCGCACAGGTCCAGGCGCTGCGCA TGGAGCACGAGGCGTCGGACACGGCGCGCGAAGTGACCCTGTCGGTCGGCGTGTCCTGCCTGTGGCCGACCCCGGGCAACGACCTGAAGCGCCTCTACGA TCTCTACGAGCATGCCGATCGCGCGCTTTACGAAGCCAAGGCATTCGGCCGCAATCAGGTGGTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCCATGGCCGATTTTGTCCCTGTGGCTGGCGCCGCCGGTGACTGCGGGACGAAGCGGCGAATGCTAGGTTCGACAGGAAAAAATGGCAGGCACGGCCGC TCTTCGCAGAGCTGCCGGCCCCGCCGCGAGACGACTTCCGGACGGACCCCATGCAGCGCTTGATCCAGGCCAACGGCCAACCGCACTACGGCATCTTCCC GAGTGCCCCGCAGCACATCAATTACCGCGATTTCGACTTCCGTTCGCCGATGGGCCGGCGCGTGGGGGCCCTGGGCAAATGGCGACGCTTCCATCAGTTC CAGTACTTCGGCCTGATCAGCCCGGAGCTGATCGGCGGCTGCGCCCTGGCCCAGCTGAGCTTGCTTGGCGTCGGCTTCGTCTACCTCTACCAGCCTTCCA GCGGACGCATGCTGGAGCGGCGCTTCAAGCTGCCGCTGGGGTTCGGAACCCGGTTTTCCCAGACCCCGGACGACGGCGTCTGCGAACTGCGCCAGGGGCG
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Amino Acid Sequence |
>diguanylate cyclase
MCVTQKDRLDDSRSNLYADQLNRGFRGLRFLPELERDYRRYMLEDSFALKRIALSVGMLVWLAFIGIDLLILAGPPLWGVLAVRLGVLVLLLVCGCLIML RRHIQLMVPLSIACVLALGVGAAAVVGLAHRADPGYPYEGLLLVSFAAYFLAGLRLSQALSCALVVLLAYLGFEWWAGTQEPLGNNLLFLLFGNLIGAVG CYLLEFKSREHFLISRLLRVMADHDSLTGLHNRRSFNQHLDRLWRQAQREQKILALLLCDVDHFKAYNDRYGHQAGDAVLQRIGAVFEANARRPLDMAVR LGGEEFALLLYGANEHEARLRAEALRAQVQALRMEHEASDTAREVTLSVGVSCLWPTPGNDLKRLYDLYEHADRALYEAKAFGRNQVVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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