Pseudomonas aeruginosa BWH060, V561_02099
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH060 adTvY-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGAACGGCAGGCGGAAGGGCATGAGTTCGCCGGTGGCCAGCACCGTCTCGCTGGCCAGCAGCCGCTGTGGGCGGTCGCGCTCGTCGATCACCAGCAGT GCCATCTGCACCTCGCTGCCGCGTGGCAGGCTGCCCTGGATGCTGCTCAGCGTTCCGCTCAGCTCGCGCAGGTGGGCCGGCAGCACCGGCTCGACCATGG TCACGCTGCGCGAAGCTTGCGGCGTTGGCGCAGGCTTCGGCTTGTCGCTGGAACAAGCGGCGAGGAGAAGGACGGCCAGCAGGGCGATTGAGCGCAGGGT CATGGGCTGCTCCATAGCGGTGGAATCCGGGCGGCGCTTGTATAGCGCAAAGTGTGATTCTTGTCGCGCTTCGCGTAGGCCGCAACGTCCGATTCTTCCC GCCTCTCCCATCGTGCCGGCGCCGGTCGATTCTGCGGGTGCTCGGTCGGGCGCGGATGCGCTACCATGCGGCTTCCTTCAGCTACGCCTGTATCAGCACC
|
|
| DNA Sequence for Gene |
>V561_02099
ATGCATTGTCCCTTCTGCGGTGCCCATGACACCAAAGTGATTGACTCGCGACTGGTCGCCGAGGGCGATCAGGTGCGCCGGCGCCGCGAGTGCCTGGCCT GCGGCGAACGCTTCACCACCTTCGAGACCGCCGAGCTGGTCATGCCGCGCCTGATCAAGCAGGACGGCAGCCGCCAGCCGTTCGACGAGGACAAGCTGCG CGCCGGCATGCAGCGCGCCCTGGAGAAGCGTCCGGTCAGCGTCGAGCGCCTGGAAGCGGCCATCGGCCACATCAAGCACCAGTTGCGCGCCACCGGCGAG CGCGAGATCAAGTCGCGGGTGCTGGGCGAACTGGTGATGGCCGAGCTGCAGAAGCTCGACGAAGTCGCCTACATCCGTTTCGCCTCGGTCTACCGGCGCT TCCAGGACCTCAACGAATTCCGCGAGGAGATCGAACGCCTCGCCCGCGAGCCGGCCAAGGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCCGCCGACCCGCTGTACATGGCCCGCGCCCTGGAACTGGCGCGCCAGGGGCTGTACTCCACCCATCCGAATCCGCGCGTCGGCTGCGTGCTGGTCAA GGACGGCCAGGTGGTCGGCGAGGGCTGGCACGTCCGCGCCGGCGAGCCGCACGCCGAGGTCCATGCCCTGCGCCAGGCCGGCGAGAATGCACGCGGCGCC ACCGCCTACGTGACCCTCGAGCCTTGCAGCCACTTCGGCCGCACCCCGCCGTGCGCCGATGCGCTGGTGGGCGCCGGGGTGGCGCGGGTGGTCGCGGCGA TGCAGGATCCCAACCCCGAGGTCGCCGGTCGCGGCCTGCTGCGTCTGATGCAGGCCGGTATCGCGGTGCAGAGCGGGGTCCTCGAGGCCGAGGCGCGGGA ACTCAACATCGGTTTCATCAAGCGCATGGAGCATGGCCTGCCGTTCGTCCGGGTCAAGCTGGCGATGAGCCTGGACGGGCGCACCGCCATGGCCAGCGGG
|
|
| Amino Acid Sequence |
>NrdR family transcriptional regulator
MHCPFCGAHDTKVIDSRLVAEGDQVRRRRECLACGERFTTFETAELVMPRLIKQDGSRQPFDEDKLRAGMQRALEKRPVSVERLEAAIGHIKHQLRATGE REIKSRVLGELVMAELQKLDEVAYIRFASVYRRFQDLNEFREEIERLAREPAKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|