Pseudomonas aeruginosa BWH059, V560_04590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH059 adTvw-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCTTGTAGCCGAGCCGTTCGTGTTCCTTGCGGATGATGTTCAGGCCGAGGTTGTGGAAGGTCGAGACGGTCAGGCCCTTGCCCTCGCCGCCGCGCAG CAGGGTGCCGACGCGCTCCTTCATCTCCCGCGCGGCCTTGTTGGTGAAGGTCACGGCGACGATGTACTGGGCGCGGATACCGCACTGCTGGACGAGATAG GCGATCTTGCGGGTGATCACGCTGGTCTTGCCGGAGCCGGCGCCAGCCAGGACCAGCAGGGGACCGCCGACGTAGTTCACGGCTTCTTGCTGCCGGGGAT TGAGTCGGGACATAGGAACAGGCCGGAAGAGAGGGTTGAAGCGGGGGCGTATTCTAACAGGCTGGCTGGCATCCGCGAGAATTAGCGTGCAAGCTGTGAC CGATCCCGAGATCGTTCACGCCATTTTGCTGTAGATTCCCTACCGCATTAGGATGATGCCGTTCGTTCTTTACGAAGATTCTTAAAACTTTGGAGGTTGC
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| DNA Sequence for Gene |
>V560_04590
TTGTCAGCGCCCGCAGAACCCTTGCGCCTGCTCCTTCTGGCGGATACGCCGGACTGGGCGCCACTGCTAGGTGAACGCCTGAGAGCGCTGGGGCCTGCCT TTTCGCTGAGCATCGTCACCACCTGGGAGGGTGCGGCCACCCTGTTCGCCGCCGAGCCCCGGGGGCTGCTCCTGGCCACGCCGGCCTGCCTGCCGCTGGG GACTCCCTGTCCCTGGCCGGTGATCCTGCTGTTGCAGCAGGAGCCGGCGCAGGCGCCGGTTGGGGTGGTCGACTGGCTGGCCGCCGAACAGCTTTCCGAG GACAGCCTGCGCCGCTGCCTGCGCTACGCGCGCGAGCGCCTGGGTTTGCAGGCGACCCTGCAACTGCTCGCCGAGCAGGATCCGCTGACCGGCATCGCCA ACCGCCAGGGCTTCCAGACCCTGCTCGCGGCGCGCCTCAGCGAATTCGACGGGCGTGGCCTGGTGCTCGGCCACCTCGACCTGGACAACTTCCGTCACGT CAACGATTCCCTCGGCCACCAGGGCGGCGACCGCCTGATCCTGCAGGTGGTCAACCGCCTGCGCGGCTTCATGGAGAACGGCGACAGCCTGGCGCGCCTG GGCAGCGACGAGTTCGCCCTGCTGCTGGACACCCGTCGCGATCCGCAACGCGCCGAGCGGGTCGCCGAACGCATCGTCGAATGCCTCGGCGAGCCCTACT GGATCGATGGCGAGAGCCTGTTGCTGGGTTGCAGCCTGGGACTCGCCCATGCCCGTGCCGACGAAGGTGCCGACCCGCTGATGTGGCATGCGCACATCGC CATGCAGCAGGCCAAGAGCCGCCAGGGTTGCACCTTCCATGTCTTCGACGAACGCATCAACCGTGGCGTGCGCAGCCTCGCCGACCTCGAAGCCGAACTG CGCCGGGCGCTGCGTCGCGACGAGCTGGAGCTGCACTACCAGCCGCGACTGTGCCTGGACAGCGGGCGCATCGTCGGCCTGGAGGCGCTGGTGCGCTGGC GCCACGGCGAGCGGGGCCTGCTCACGCCCAGCGAGTTCGTCCCGCTGGCCGAGGAGAGCGGGCTGATCGTGCCGCTCGGCTACTGGGTCATCGCCCGCGC CCTGCGCGACATGCAGTGGCTCAACGGGCGCGGCCTGGAGCCGTTGCACATGGCGGTGAACCTGTCGTTCCGCCAGTTCCAGGACAGCCAGTTGCTGCCG ACCCTGCAACGGTTGATCGAAGAGCACGGCGTCGACGCGCGCTGGCTCGAGTTCGAACTGACCGAGACCGCCGTGATGCGGCGCAGCGACCAGGTGCTGC AGACCATGCAGGCGCTCGGCCAACTGGGCGTGCGCTTTTCGCTGGACGACTTCGGCACCGGTTTCTCGTCCTTCGTCCACCTCAATAGCCTGCCGATCAC CCTGTTGAAGATCGACCGCAGCTTCGTCGGCGGCATGGACCAGCGGGCGGAAAACTTCCAACTGGTGCGGGCGATGATCAACCTGGCGCACAACCTCAAC CTGGAAGTGGTTGCCGAAGGCGTGGAGACCCTGCGCCAGCAGGAGCAGTTGCGCGATTTCGGTTGCGACCAGGTGCAGGGCTACTGGATCAGTCCGCCGC TGCCGTTGGCGGAACTGGCGCGTTTCCTGGGCATAGGCGAGCGCTCGGCGCACCGCGGCCAGCCGCTCGGCAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGACGCCTCGCTGGCCGTGGCTTTCGGCAGCAACCGCGCGGTCTTCCACTCGAAGGCCAGGGTCAGGCCAATGGCCGCGCAGGCCAGGCCGCCGGC CAGCCCCCACCAGACGCCCGCGGCGCCCCAGCCGGCCGCGAACGCCAGCAGGCAGGCCAGCGGCACGCCGACCAGCCAGTAGCAGGCCAGGCCGACCAGG AAGGTGGTGCGGGCGTCCTTGAGACCGCGGATCGCGCCCATGGCGACGTTCTGGGTGCCGTCGAACAGCTCGAACCAGGCGGCGATCGCCAGCAGCGAGA CGGCCATCGCGGCCACCTCCCGGTTGGCCGGGGCGTCGCGGTCGAGGAACAGGCCGATGATGGCCTCCGGCATCCACCAGAAGAGCCCGGCGAAGAGCAG CATGCACAGCGCGCCGAAGCCGATGCCGACACGCCCGGCGCGGCGTGCTTCGAGCAGGCGGCCGGCGCCGAAATGCTGGCCGATGCGGTAGGTGGTGGCG
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| Amino Acid Sequence |
>diguanylate cyclase
MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSE DSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARL GSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAEL RRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLP TLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLN LEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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