Pseudomonas aeruginosa BWH059, V560_03690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH059 adTvw-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAACAGGCTGGCCGGATTCACCGAATAGACCAGCAGGGAACCGCAGAACAGCCCCAGGCCCAACAGGCCCAGGCGGCGCAACCAACCGTCGTGGCGG AGCAACACCACCAGCAGGGCGCCGTACAACAGGCAATCGACCCGCGCCACCGAATCCTTGACCTGCAACGACTGTTCCCAATCCCCCAGCCACCATCCAG CGGCCACGCCCAGCACGACTCCGGCGCCGACATGAATGCCCGCCTGGATCATCGTCACCCTTCCCCCCTCGGAAATGGTCGGACAGTGCAAGCCGCCACT ATGCCCACGGCAAGCTGAACCATCGCTGAACGAATACCAGCAAATGGCCTTCGGCCACTTCGCCGACGCAACTCCTGCAAAACCCGGCGGTCTTCTCCCT GTGACAGGACGCCGCCCCGCACAGAAAAAATCTGCTGCGACCACTTGGGAACTCGCCCGAGAGGCCATACTCTGTCGCGCAAATTCCCATGAGGTGGCTG
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| DNA Sequence for Gene |
>V560_03690
ATGCGCACCGACGCTCCCGTTCCAGAACATCCCGCTCCACCCAGCTCTCCCGCGTCCCCACAACGCATCCGGCTGATCGATCGGATTACCGCCTACCGCC AGCCCATCGGCCTGGTCTTCACCTTGCTGCTGTTCGGCCTGGCGCTGGTGGCCTGCTACCACCTGCTACGGGAGATCGATCCCGGCGCCCTCCACGATGC CATCGCCGACGTGCCCAGGCCGGCGCTGCTCGGCGCCCTGGGCGCGACCGCCCTCGGCTTCGTCATCCTGCTCGGCTACGAGTGGTCGGCCAGCCGCTTC GCTGGCGTCACGCTGCCCATGCGCAACCTGGCCACCGGTGGCTTCAGCGCCTTCGCCATCGGCAATGCGGTAGGCCTGTCGCTGCTTTCCGGCGGCTCCG TACGCTACCGACTGTATTCCCGGCATGGCATCGGCGCTGCCGAAATTGCCCGGATGACGCTATTTGCCAGCCTTTCCCTGGGCTGCGCACTGCCGGTGCT GGCGGCACTCGCCGCACTCTGCGACCTCGACGATGCGGCATCGGCGCTGCACCTGCCCCACGCCCTGGTCGCCGTCATCGCGATCGCCGTCCTGTTGCTG GCTGTCGGCCTGGTGGCGTTCCTGGCCCGGCACCGTCTGCCGGGAGAACGGCCGTCCCCCGACAGCCTGCTGGTCCGCCTCGGCCGCCGCAGCCTGCGCC TGCCAGGCCTGCGCCTATCGCTGCTGCAACTGCTGATCACCGCCCTCGACGTCGCCGCCGCCGCTACCGTCCTTTATCTGTTGCTGCCGGAAACCCCACC CTTCGCGGCGTTCCTGCTGGTCTACCTGCTCGCCCTGGCCGCCGGCGTACTCAGCCACGTACCGGGCGGAGTTGGGGTGTTCGAGGCGGTGCTGCTGGCC GCGTTCGCCGGCCAACTGGGCGCCGCGCCGCTGGCCGCGGCCCTGCTCTTGTACCGCTTGATCTACGTGGTGCTGCCGCTGCTGTTGGCCTGCCTGTTGT TGCTGTTCCTCGAAGCGCGCCGGTTGTGGGTGACGCGCCAGGCGATCCGCGTCGCCTCGGGTTTCGCCGCACCGATCCTGGCGATCCTGGTCTTCCTCTC CGGTGTCGTGCTGCTGTTTTCCGGCGCCACGCCGGCGATCGACACCCGCCTGGAGCACCTCGGCTTCCTCATTCCACATCGCCTGATCGATGCCTCGCAC CTGGTCGCCAGCCTGATCGGCGTGCTCTGCCTGCTGCTCGCGCAGGGTTTGCGCCGACGGCTGTCGGCCGCCTGGGCCCTGACCCTGGTGCTGTTGCTGG TGGGCGCCCTGCTTTCGCTGCTGAAAGGCTTCGACTGGGAAGAAGCCAGCCTGCTGAGCCTGACCGCCGCGCTGCTCGCCATGTTCCGCCGCTCCTTCTA CCGTCCCAGCCGGCTGATGGAAGTACCCTTCTCGCCGCTCTATGTAGGCGCCAGCATCTGCGTGGTCGGCGCCTCGGTCTGGCTGCTGCTGTTCGCCAAC CAGGACGTGCATTACAGCAACCAGCTCTGGTGGCAGTTCGCCCTGGACGCCGACGCCCCGCGCGCCCTGCGCGCCGCCCTCGGCAGTTGCCTGCTGCTCC TGGCCCTGGCCCTTGGCTGGCTGCTGCGCGCGGCACCGCCGGCGATCCGCGAGCCGAACGCGGAAGAGCTGCAGCGCGCGGCGCGGATCATCCGCCACTC GGACCAGCCGGATGGCGGCCTGGCCCTGACCGGCGACAAGGCCCTGCTCTTCCATGAGAGCGACGACGCTTTCCTCATGTACGCCCGCCGCGGTCGCAGC ATGATCGCCCTGTACGACCCGATCGGCCCGGCCATGCAGCGCGCCGAACTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCATGCCCGCCCGGTGT TCTACCAGGTGCGTGCCGAGAACCTGCCATTCTACATGGACATCGGCCTGACCGCCCTCAAGCTCGGCGAAGAAGCGCGAGTCGACCTGCTGCGCTTCGA CCTGGAGAACAAGGGCAAGGAAATGAAAGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGGCCCTGGAGTTCCATGAACCGGGCCAGGCT CCGCTGGACGAGCTGAAGGCGATATCGGACGCCTGGCTGGGCGGCAAGCAGGTGCGCGAGAAAGGCTTCTCCCTGGGCCGCTTCACCCCGGCGTACCTGA ACTTCTTCCGCATCGCCATCGTCCGCCACCAGGGCAAGCCGGTGGCCTTCGCCAACCTGCTGGAAACCGACAGCCGCGAACTGGCGAGCCTCGACCTGAT GCGCGTGCACCCGGACGCGCCGAAGCTGACCATGGAGTTCCTCATGCTCGGCCTCATCCTCCACTACAAGGCCCAGGGCCACGCGCGCTTCAGCCTCGGC ATGGTGCCGCTGGCCGGGCTCCAGCCAAGGCGCGGCGCGCCGTTGACCCAGCGCCTGGGCGCGCTGGTCTTCCGGCGGGGCGAACAGTTCTACAATTTCC AGGGGCTGCGACGCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGCTACCTGGCCGTGCCAGCCGGGCTCGACCCGCTAGTGGCCCTGGCCGATAC CGCCGCGCTGATCGCCGGCGGCCTGACTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTCTGTCGTGAAACGTCACTGGCGCCGTTTTCTGGTCGCCGCCCTGGTGCTGATCGTCGGTGCCGCCCTGCTGCTCTGGAGCCGACCGGCGGCCCAG GCGAAACTGGAAGCCCTGGACCTCGACGACGGCGGCCACGCCACCCTTGCCGAACCCGGCGAGAAGCCGCGCTCGCGGGTGGTGGTGATCGCCGCCCCCG AACAGCAACTGAACGACGCCCAGATGCTGAACCTGGCTCACGACAGCGCCGCCCGGGTGATCCAGTACTTCCCCCCGGAAAACGGCGATTGCAGGGCGCA GCAGTCCCGGCTCGAAGCGGTCATTGCCCGCCTCGGCGGCAAGCCGAACCTGGTCGCCGGCATCGGCCCAGGCTCGACCACCGCCTGGCGCTGGCTCGCC AGCCAGGACGACGACAAGGCCAAGGCGCTCTCGGTCGGCTTCGACATTGCCCTGGCCGAGCGCGACTGCGACGCCCCGCTGCCGCACCAGGCGTCGCACG
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| Amino Acid Sequence |
>membrane protein
MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLLFGLALVACYHLLREIDPGALHDAIADVPRPALLGALGATALGFVILLGYEWSASRF AGVTLPMRNLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSLGCALPVLAALAALCDLDDAASALHLPHALVAVIAIAVLLL AVGLVAFLARHRLPGERPSPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYLLALAAGVLSHVPGGVGVFEAVLLA AFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLLLFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIPHRLIDASH LVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEASLLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFAN QDVHYSNQLWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRHSDQPDGGLALTGDKALLFHESDDAFLMYARRGRS MIALYDPIGPAMQRAELIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTWNRGQRDGLALEFHEPGQA PLDELKAISDAWLGGKQVREKGFSLGRFTPAYLNFFRIAIVRHQGKPVAFANLLETDSRELASLDLMRVHPDAPKLTMEFLMLGLILHYKAQGHARFSLG MVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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