Pseudomonas aeruginosa BWH059, V560_03077
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH059 adTvw-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTGAATAATTTGAGCTGTAATTTCTGGCACCCCGAGAGGTCGGCACCCTAAATTCTGGCACCAAAATCTTTGGTCCGGTGCTAGCGCACGTGGCTGGT ATAAATGAGCGTCCGCTCACAACGTCTGGGCGGATGTGACCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAATAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCTCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
|
|
| DNA Sequence for Gene |
>V560_03077
ATGCAGGCGCGAACCGGCATTTCCGAACGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTATGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCATGGCATCGCGGTGGAGCGCGAACGTCTGAGTTTGCCG AGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGTGGATCAAATGCCTGACGGTGGTCGATGACTTCACCAAGG AGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGATCCG CACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACGCAG AATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGGCCT GGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAACTGAA GCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCAGACCAACTGCGCCCCCAGCGCCCGCACCACCCGCTGCAACTCCGCCCGTCCACCGGTGGCGACGCGCAGGC CGGTGATCTCGCGGCGCGGCGGGTAGTGTTTGCGCAGGGCGTCGAAGGCGGCGCGGCGGGTGGCGCTGTCGCCGGTCAGGCTGCGACGGAAGGCGGCGTC GTCGCTGCGCGGGTCGTATACCGCGCGGCACAGCGTGGCCAGCGCCCAGGCCGGGTCGCAGCCGGGGTTGAGTTGCAGGCCGGCGAGCCAGGTTTCCGGC AGCACGTCTTGCAGGCTCACGCGTTCGGCGATGCCGCGCCAGGCGCAGTAGGCCTGGTAGATCTGTGCGGTGCCGCGCAGCTTGCCTTCCAGGCTGTAGC CGGCGATGTGCGGCGTGGCGATCAGGCAGCGCGCGGCCAGTTCGGGGTCGGCCTGCGGTTCGCCTTCCCAGACGTCCAGCGCCACTTCCAGGTCGGCGCC
|
|
| Amino Acid Sequence |
>insertion sequence IS407 OrfB
MQARTGISERRACQLIGLSRSVLRYQPRASMQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRHGIAVERERLSLP SAPNQVWSMDFVFDALSTGRWIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPTQ NAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|