Pseudomonas aeruginosa BWH059, V560_00080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH059 adTvw-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTTGGCCTGCTGGAAGAGATCGAGGCCTGGCCGCAGGGCTGGGACAGCGATGTCGGCCCCGGCGGCGCGCTGCTGTCCGGCGGCCAGCGGCAACGC CTGTGCCTGGCTCGCGGGCTGCTCTCGGCAGCGCCGTTGCTGCTGCTCGACGAGCCCACCGCCAGCCTCGATGCAGCCAGCGAGGCGCAGGTGCTGCGCA GCCTGCTCGGGTTGCGCGGCCGGCGCACCCTGCTGGTAGTGACCCACCGCCCGGCGCTGGCGCGTCAGGCCGACCAGGTACTGCTGCTGGAGAAGGGGCG GCTGCGCCTGAGTGGACGTCACGCCGATCTGCTCGTCCGGGACGACTGGTATGCCGGCTTCGTCGGGCTGGCGGGCGAGGAAAGTTCCGCGACGGCCGTG GATCGATAGAGAAAGACCGGCAATCGAAAAAGCCCCGGAGATGATTTCTTCATAATGATAAGCATTATCAAATCGTATATCCCCCGAGGCTGTTCGAACG
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| DNA Sequence for Gene |
>V560_00080
ATGAAAACGGAGACGAAGGTGATCAAGGGACGCCAGGGCATCGCCCGCAATCGGCACACCCCGTTGTGCCTGGGCCTGCTGCTGGCGCTGAGTCCGCTGG CCGCGGCCGTGGCCGACGCGCGCAAGGACGGCGAGACGGAACTGCCGGACATGGTGATCAGCGGAGAAAGCACGTCCGCCACCCAGCCGCCGGGGGTGAC TACCCTGGGCAAGGTGCCGCTCAAGCCGCGCGAGCTGCCGCAGTCCGCCAGCGTCATCGACCATGAGCGCCTCGAACAGCAGAACCTGTTCAGCCTCGAC GAAGCCATGCAGCAGGCCACCGGGGTCACCGTGCAGCCGTTCCAGCTGCTGACCACCGCCTACTACGTGCGCGGCTTCAAGGTCGACTCCTTCGAGCTGG ACGGGGTGCCGGCACTGCTCGGCAATACCGCCAGTTCGCCGCAGGACATGGCGATCTACGAGCGGGTCGAGATCCTCCGCGGCTCCAACGGACTGCTGCA TGGCACCGGCAACCCGGCGGCCACCGTCAACCTGGTGCGCAAGCGGCCGCAGCGCGAGTTCGCCGCCAGCACCACCCTCAGCGCTGGGCGCTGGGACCGC TACCGCGCCGAGGTCGACGTCGGCGGCCCGCTGAGCGCCAGCGGCAACGTGCGCGGCCGAGCGGTGGCCGCCTACGAGGATCGCGACTACTTCTACGACG TGGCCGACCAAGGCACCCGCCTGCTCTACGGGGTGACCGAGTTCGACCTGAGCCCCGACACCCTGCTCACCGTCGGTGCGCAATACCAGCACATCGACTC GATCACCAACATGGCCGGGGTACCGATGGCCAAGGATGGGTCCAATCTCGGGCTGTCCCGCGACACCTACCTCGATGTCGACTGGGACCGCTTCAAGTGG GACACCTACCGCGCCTTCGGCTCCCTCGAACAGCAACTGGGCGGCGGCTGGAAAGGCAAGGTCAGCGCCGAATACCAGGAAGCCGATTCGCGCCTGCGTT ACGCCGGCTCCTTCGGCGCCATCGACCCGCAGACCGGCGACGGTGGCCAGCTGACGGGCGCCGCCTACAAGTTCAAGAGCATCCAGCGCAGCCTCGACGC CAACCTCAATGGGCCGGTGCGACTGTTCGGCCTGACCCACGAACTGCTCGGTGGGGTCACCTACGCCCAGGGCGAGACCCGCCAGGACACCGCACGCTTC CTCAACCTGCCGAACACCCCGGTCAATGTCTACCGCTGGGACCCGCACGGCGTGCCGCGCCCGCAGATCGGCCAGTACACTTCGCCGGGCACCACCACCA CCACCCAGAAAGGCCTCTATGCCCTGGGTCGGATCAAGCTCGCCGAGCCGCTGACCCTGGTGGTCGGCGGCCGCGAAAGCTGGTGGGACCAGGACACCCC GGCCACCCGCTTCAAGCCCGGTCGCCAGTTCACGCCCTACGGCGGGCTGATCTGGGACTTCGCCAGGGACTGGTCGTGGTATGTCAGCTACGCCGAGGTC TACCAGCCGCAGGCGGATCGCCAGACCTGGAACAGCGAGCCGTTGAGCCCGGTGGAAGGCAAGACCTACGAAACCGGGATCAAGGGCGAACTGGCCGACG GCCGCCTGAACCTGTCGCTGGCGGCGTTCCGCATCGACCTGGAGAACAATCCGCAGGAAGACCCGGACCATCCGGGGCCGCCCAACAATCCGTTCTACAT CAGCGGCGGCAAGGTGCGCAGCCAGGGCTTCGAGCTGGAAGGCACCGGCTACCTGACGCCCTACTGGAGTCTCTCGGCCGGCTACACCTACACCAGCACC GAGTACCTCAAGGACAGCCAGAACGACTCGGGGACGCGCTACTCCACCTTCACCCCGAGGCACCTGCTGCGCCTGTGGAGCAACTACGACCTGCCCTGGC AGGATCGGCGCTGGAGCGTCGGCGGTGGACTCCAGGCGCAGAGCGACTACAGCGTCGACTACCGTGGCGTGAGCATGCGCCAGGGCGGCTACGCACTGGT CAACATGCGCCTGGGCTACAAGATCGACGAGCACTGGACGGCGGCGGTCAACGTCAACAACCTGTTCGACCGGACCTACTACCAGAGCCTGTCCAACCCC AACTGGAACAACCGCTACGGCGAACCGCGCAGCTTCAACGTCAGCCTGCGGGGCGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCGCGCCAGTCGGGCTTCGGCTGGGCCTGGCGGGTTCCGCTGGCGCTCGCCGGCAGCCTGGCGGCGGCGACCGCCAGCGGCTATCTGTTGACTCGCGG GCTGCCCCTGGACGACCCGCTCGAGCGTCTCTACGCCGGGCTCTTCGGCGCGCTCGGGGTGGGCTTGTTGCTGCTTGTCGGCGGGTTGCTGGCGCGTGAT CCGGGCAACTTCGCCTGGCGCCTGGGCGGTAGCCTGCTGGTACTGGGCCTGGCGTTGTGGCTGCTGGCGGGGCGCGGTTGAAGTGGCGGCGCGTCCTCTC CTGCTCTCGCTGCACGGTGGCGCCGGCGCGCTGTTCGGCGTGTTGCTGTTCGTGGTGCTGTTCAGTGGCGCCTGGAGTCTTGGCCACGACGACCTGCGCG AGTGGCTGCGGGCCCCGGCGCAGGCGGGAGGAGAAGCCCTTGCGCTGGAGCGCCTGCTCGAACGGGCGGGCGAGGAAGGCGTCGACATCCGCGATGCGAC
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| Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLD EAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDR YRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKW DTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLTGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARF LNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEV YQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTST EYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNP NWNNRYGEPRSFNVSLRGAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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