Strain | Pseudomonas aeruginosa BWH058 adTyf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACATCCAGGCGCGCAGCCATCAGCCCGTCTCCAGGATCGCAAGTCCCGCGTTGCAGGGCGAAGGACTCGATCCGCGCTGGCTGTCGCTGGTCTCGCGCA GCGATACGCTGTTCATCGCCAGCCAGCATGCCGACCCGCTCAGGGGCGGCGTCGACGTCTCCCATCGGGGCGGGCCGCCGGGCTTTCTCCGGCTCGGCGC GGATGACCGCCTGTGGTTGCCCGACTACGCCGGCAACCGCCTGTTCAATACCCTCGGCAACCTGCTCCAGGAGCCTCGCTGCGGCCTCCTGTTCATCGAT TTCGACAACGGCGACCTGCTGCACCTGCACGCCGAGGCCGAGCTGTTCTGGCCGGGTTCGCAGCCATCCATCCCCTGGCCCGCCGGCGCCGAGCGCCTGC TGGCGTTGCGCCCCGCAGGCTGGCGCTGGCGGCGCGGCCGCCTGCCGCTGGCATTCGGCGAGCCCCAGCCATCCCCTTTTCTTCCTGCCGGTGAATCTTG
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DNA Sequence for Gene |
>V559_02030
ATGCCTTTCCTGTATCGCCTTGCCTCGTTGTTGATCGCCCTCCTCGTCCTGCCGGTGCAGGCGGCGGAAATGCGAGTCGCCCTGTTGCGCACCTCGGGAG TGGAAACCCTCGATGCGCTCACCGTCGACGGCGGCTCCTGGGTGCGCCGGGTGCCGCTCAGCCATACCGCGGTGCTGATCGAGCACCATGCCGCCACCCT GCTCTTCGACACTGGCCTGGGGCGCGACATCGACGCCCAGTTCCGCGCCGACATGCCCTGGTGGGCGGCGCCGCTGTTCGCTTACCAGAAAGTCGTCCCG GCGCGCGACCAACTGGACGCAGCCGGTATCCGCGTCGATCGCATCCTGCTGTCCCACGCACACTGGGATCACGCCTCGGGCCTGGTCGACTTCCCCGAAG TACCGGTCTGGGCACCCTACGAGGAGATCGCCTTCAGCCGCATCGCCACCCCGCCGGCCGCCTTCCCCAGCCAATTCCGCCATGGCGTGCGCTGGCGACC TTACAGCTTCGATCCGCAGCCGTTCATGGGCTTCGACGAAAGCCTCGACCTGTTTGGCGACGGCCGCCTGGTGCTGGTCCCCCTGCCCGGCCATACGCCC GGCTCAGTCGGTCTGTTCGTCACCCTCGACAGCGGGCGCCGGCTGTTCTTCAGCGGCGACACCAGTTGGCGACTCGAAGGCGTCGAAGGCCCACGGCAGA AATTCTTCGCCGGCCGCGCCCTGGTCGATCGCGATCCCGCGCGCACCCTCGCGCAACTGGCGAAGATCCGCCTGCTGCTCCGCAGCGACCCGCGCCTGAG CGTGATTCCGGCGCACGATGCGCGGGTCCAGGCCGCCCTGGGCTACTTCCCGCACTGGCTGGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGAAAGCCCGTCCTAGACAGGGTTCGTGCCAATTCGCGGCCACCCTCGACTAATGTCTAACAGTGGCCGTCTTCCTGTAGTGCTTAAGTAACCGGGCT GTCACAGGCCGACGTGGCGTCACGCCGCCGCCATCGGCCTGCCCCAAGCGCTCGAGGAGACAATAACAATGAGCATGACCCCGATCGCCCGTGCCGTGGC TTTTGCCGCGCTGGGTTCCAGCATTACCGTCCCAACCCTGGCCCATGCCGAGTTCATCAAGGACAGCAAGGCCAGCATCGAACTCCGCAACTTCTACTTC AACCGTGATTTCCGCCAGGAAGGCGCCAGCCAGTCCAAGGCCGAGGAATGGGCCCAGGGCTTCCTCCTGCGCTACGAGTCCGGCTACACCGAGGGCACCA TCGGTTTCGGCGTCGACGCCATCGGCCTGCTCGGGGTGAAGCTCGACTCCAGCCCCGACCGCAGCGGCACCGGCCTGCTCAAGCGCGACCGCGAGACCGG
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Amino Acid Sequence |
>hydrolase
MPFLYRLASLLIALLVLPVQAAEMRVALLRTSGVETLDALTVDGGSWVRRVPLSHTAVLIEHHAATLLFDTGLGRDIDAQFRADMPWWAAPLFAYQKVVP ARDQLDAAGIRVDRILLSHAHWDHASGLVDFPEVPVWAPYEEIAFSRIATPPAAFPSQFRHGVRWRPYSFDPQPFMGFDESLDLFGDGRLVLVPLPGHTP GSVGLFVTLDSGRRLFFSGDTSWRLEGVEGPRQKFFAGRALVDRDPARTLAQLAKIRLLLRSDPRLSVIPAHDARVQAALGYFPHWLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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