Pseudomonas aeruginosa BWH058, V559_00003
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH058 adTyf-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGTCTGCTCACCGAGCAGGACGGCGAAGTCGGCATCGTCCTGGGCCAGCACCATATCCGTGCCACCACTGGCGAATTCACCTTCACTTCGAAGCTGGT GGACGGCAAGTTCCCGGACTACGAACGCGTACTGCCGCGCGGTGGCGACAAGCTGGTGGTCGGCGACCGCCAGCAACTGCGCGAAGCCTTCAGCCGTACC GCGATCCTCTCCAACGAAAAGTACCGCGGCATTCGCCTGCAGCTTTCCAACGGTTTGCTGAAAATCCAGGCGAACAACCCGGAGCAGGAGGAGGCCGAGG AAGAAGTGCAGGTCGAGTACAACGGCGGCAACCTGGAGATCGGCTTCAACGTCAGTTACCTGCTCGACGTGCTGGGTGTGATCGGTACCGAGCAGGTCCG CTTCATCCTTTCCGATTCCAACAGCAGCGCCCTGGTCCACGAGGCCGACAATGACGATTCTGCCTATGTCGTCATGCCGATGCGCCTCTAATCACACTGA
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| DNA Sequence for Gene |
>V559_00003
ATGTCCCTGACCCGCGTTTCGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCCCCCTCCCCTCGCATCAACATCCTCTACGGCGATAATGGCA GCGGCAAGACCAGTGTGCTCGAAGCCATCCACCTGCTGGGCCTGGCGCGTTCATTCCGCAGTGCGCGCTTGCAGCCGGTGATCCAGTATGAGGAAGCGGC CTGCACCGTATTCGGCCAGGTGATGTTGGCCAACGGCATCGCCAGCAACCTGGGGATTTCCCGTGAGCGCCAGGGCGAGTTCACCATCCGCATCGATGGG CAGAACGCCCGGAGTGCGGCTCAATTGGCGGAAACTCTCCCACTGCAACTGATCAACCCGGACAGCTTTCGGTTGCTCGAGGGAGCGCCGAAGATCCGCC GACAGTTCCTCGATTGGGGAGTGTTCCACGTGGAACCTCGGTTTCTGCCCGTCTGGCAGCGCCTGCAGAAGGCGCTGCGCCAGCGGAACTCCTGGCTCCG GCATGGTAAACTGGACCCCGCGTCGCAAGCGGCCTGGGACCGGGAATTGAGCCTGGCCAGCGATGAGATCGATGCCTACCGCAGAAGCTATATCCAGGCG TTGAAACCGGTATTCGAGGAAACACTCGCCGAATTGGTTTCACTGGATGACCTGACCCTTAGCTACTACCGAGGCTGGGACAAGGACCGGGACCTCCTGG AGGTTCTGGCTTCCAGCCTGTTGCGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGGCAGGTCATAACGC CGCGGAGATTCTCTCGCGCGGTCAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAAGGCCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTC TACCTGGTGGACGACCTGCCCTCGGAATTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCG TGGACCCGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTATCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAG TGAAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACGATGG CACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAACTCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATACGGAT GAGTCGATCACTGTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATCATGACCGTCCTCCACG CCGGCGGCAAGTTCGACGACAACACCTACAAAGTGTCCGGCGGCTTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAGCTGCGCCTGAC CATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGTACCGAA
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| Amino Acid Sequence |
>recombinase RecF
MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDG QNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQA LKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQCV YLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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