Pseudomonas aeruginosa BWH057, V558_05207
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH057 adTyM-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCGCTGGCGGAGCGGAATCCGATGGACGTGGCGGCTCTGTTCGCCGCCTGAGCGTGGGAAGGCACTTATCAGGCACTTCCGAAGGCACTACCGGACGA TATCGATTCCATCGCCAACGCGGTAACTTCGAAGTACCTAAACCTTCATGAAACTGCAACTTCCAACTCCATCGACAGCTCTGGAAGTACATCCTCGGTA TTTTCCAAGCCCCTAACCAAAGTCTGGATCGTTTCGTCACAGGAAACGCTGGAGCGCCTATTCCAGAGCGCTTCGAACAATCGGTAAAAATAAAATCAAA ATAATCAGACGCAGTTCAAAAACAACCAGAACAGATAGTTTTTCCGCCTTTCCCAACATGCTCCTCTCGCCTTGACTCGTTCGATGCAGCGGATCGCCCA TGCGTATTTCCGGCATTGTCCGAGGCCCATTCCCTGTTCGACGCGATACCCGGCGCACCCATAACAATATGCCGCCCTCCACGGGCCGATAGCGCCAGTT
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| DNA Sequence for Gene |
>V558_05207
GTGAGCCTGTCCACCACTGCATTTCCCTCACTGCAAGGAGAGAACATGAGTCGCTCACCCATCCCTCGCCACCGAGCGTTGCTGGCCGGTTTCTGCCTGG CTGGCGCGCTGTCCGCCCAGGCGGCCACCCAGGAAGAAATCCTCGATGCGGCACTGGTCAGCGGGGATTCCTCGCAACTGACCGACAGCCACCTGGTCGC CCTGCGCCTGCAGCAGCAGGTCGAGCGCATCCGCCAGACCCGCACCCAGTTGCTCGACGGTCTCTACCAGAACCTCAGCCAAGCCTATGATCCTGGCGCC GCCAGCATGTGGGTCCTGCCGGCAAACCCGGACAATACCCTGCCCTTCCTCATTGGCGACAAGGGGCGCGTGCTCGCCAGCCTGAGCCTGGAGGCCGGCG GCCGCGGGCTGGCCTATGGCACCAACGTGCTCACCCAACTGAGCGGGGCCAATGCCGCCCACGCACCGCTGCTGAAGCGGGCGGTGCAGTGGCTGGTGAA CGGCGACCCGGGCGCGGCTACTGCGAAGGACTTCAAGGTCAGCGTGGTCGGGGTGGACAAGACCGCCACTCTCAACGGCCTGAAGAGCGCCGGCCTGCAA CCGGCGGACGCCGCCTGCAACGCGCTGACCGACGCCAGTTGCGCCAGCACCAGCAAATTGCTGGTACTGGGCAACGGCGCCAGCGCCGCTAGCCTGAGCG CCACGGTGCGCGCACGGCTACAGGCCGGGCTGCCGATCCTCTTCGTGCACACCAATGGCTGGAACCAGAGCAGCACCGGCCAGCAGATCCTCGCCGGCCT GGGCCTGCAGGAAGGCCCCTACGGCGGCAACTACTGGGACAAGGACAGGGTGCCATCCAGCCGCACCCGGACGCGTTCGGTCGAACTGGGCGGCGCCTAT GGCCAGGACCCGGCGCTGGTGCAGCAGATCGTCGACGGTAGCTGGCGCACGGACTACGACTGGTCGAAATGCACCTCCTACGTCGGTCGCACCACCTGCG ACGACGTGCCGGGACTGAGCGACTTCAGCAAGCGCGTCGATGTATTGAAAGGCGCCCTCGACGCCTACAACCAGAAGGCGCAGAACCTCTTCGCCCTGTC CGGCACCACCTCGCTGCGGCTCTGGCTGCTGTGGGCCGACGCGGTGCGGCAGAACATCCGCTACCCGATGGACAAGGCCGCCGACACGGCGCGCTTCCAG GAAACCTTCGTCGCCGACGCCATCGTCGGCTACGTGCGCGAGGCCGGCGCGGCGCAGAAGGAACTGGGCAGCTACGCCGGCCAGCGCCAACAGTCGATGC CGGTATCGGGCTCGGAGGAAACCCTGACCCTCACCTTGCCGTCGGCCCAGGGCTTCACCGCCATCGGCCGCATGGCGGCGCCGGGCAAGCGCCTGAGCAT TCGCATCGAAGACGCTGGCCAGGCCAGCCTGGCGGTCGGCCTGAACACCCAGCGCATCGGCTCGACGCGGCTGTGGAATACCCGCCAGTATGACCGCCCG CGCTTCCTCAAGAGCCCGGACATCAAGCTCCAGGCAAACCAGTCGGTGGCGCTGGTATCGCCCTACGGCGGCCTGTTGCAACTGGTCTACAGCGGCGCCA CGCCGGGACAGACGGTAACCGTCAAGGTAACCGGCGCGGCCAGCCAGCCGTTCCTCGACATCCAGCCGGGCGAGGACAGCAGCCAGGCGATTGCCGACTT CATCCAGGCGCTGGACGCCGACAAGGCCGACTGGCTGGAGATCCGCAGCGGCTCGGTGGAGGTCCACGCCAAGGTGGAGAAGGTCCGTGGCTCGATCGAC AAGGACTATGGCGGCGACGTCCAGCGCTTCATCCGTGAGTTGAACGAGGTGTTCATCGACGACGCCTACACCCTGGCCGGCTTCGCCATTCCCAACCAGG CGAAGACTCCGGCAATCCAGCAGGAATGCGCGGTGCGCGGCTGGGACTGCGACAGCGAGACCCTGCACAAGCTGCCCGGCACCCAGCACATCAACGTCGA CCAGTACGCCCAGTGCGGCGGCGGTTGCAGCGGCAACCCCTACGACCAGACCTGGGGCCTGAACCCGCGTGGCTGGGGCGAAAGCCATGAGCTGGGCCAC AACCTGCAAGTGAATCGACTGAAGATCTACGGCGGGCGCTCGGGCGAAATCTCCAACCAGATATTCCCGTTGCACAAGGACTGGCGCGTGCTCCGCGAGT TCGGGCAGAACCTCGACGATACGCGGGTCAACTACCGCAACGCCTACAACCTGATCGTCGCCGGACGCGCCGAGGCCGATCCGCTGGCAGGCGTATACAA GCGCCTGTGGGAAGACCCGGGCACCTACGCGCTGAACGGCGAGCGGATGGCCTTCTATACCCAGTGGGTGCACTACTGGGCCGACCTGAAGAACGATCCG CTGCAGGGTTGGGATATCTGGACCCTGCTCTACCTGCACCAGCGCCAGGTGGACAAGTCCGACTGGGACGCCAACAAGGCCGCTCTCGGCTACGGCACCT ACGCCCAGCGCCCGGGAAACAGCGGCGATGCCAGCAGCACGGACGGCAACGACAACCTGTTGCTCGGCCTGTCCTGGCTGACCCAGCGCGACCAGCGGCC AACCTTCGCGCTATGGGGCATCCGTACCTCGGCAGCGGCCCAGGCGCAGGTGGCGGCCTACGGTTTCGCCGAGCAGCCGGCGTTCTTCTATGCCAACAAC CGGACCAACGAATACAGCACGGTGAAGCTTCTGGACATGAGCCAGGGGTCGCCGGCGTGGCCGTTTCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGTAGCTGAGGGGGCTGGCGCGGGGTGATGCTTCTCGCTCCGCGCCGGTCCTCATGCCCCTCTCCCCGACGGGAGAGAGGGTCGGCCATGCCAGCGGG CAATGCCGTGCCAGGCTGGCAAGCCAAACTGTCGTTCAAGCTGAACGATCCTGCGCAATAATGAGCCCCTTCCACCAGCAAGGACCGCTCATGACCGACC GCCTTCCCTGCCGCGCCTGCGGCCATCTCATTCTCCCGACCACGGCGGCGAGGAACGACGGACTGTGCATTCCCTGCAAGGGCGGCTACCGGCAGAACAT CGAGGATGGCAAGCGTTTCCACACGGAGCGACGGCGCTACCTGGCGAGTCCGCAGGCGCTGTACTGGAGCGCGCTGGTGAATCGCGTCTACGATGGCCGC GAGGGATTCGCCGGGCTGTCGCCGGCCGAACGGAGCTACTACGCAGTGAGCGTGCTCAGCGGCGAAGTGCACAACGGCGGCTTCGACCAGTACTTCGGCA
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| Amino Acid Sequence |
>hypothetical protein
MSLSTTAFPSLQGENMSRSPIPRHRALLAGFCLAGALSAQAATQEEILDAALVSGDSSQLTDSHLVALRLQQQVERIRQTRTQLLDGLYQNLSQAYDPGA ASMWVLPANPDNTLPFLIGDKGRVLASLSLEAGGRGLAYGTNVLTQLSGANAAHAPLLKRAVQWLVNGDPGAATAKDFKVSVVGVDKTATLNGLKSAGLQ PADAACNALTDASCASTSKLLVLGNGASAASLSATVRARLQAGLPILFVHTNGWNQSSTGQQILAGLGLQEGPYGGNYWDKDRVPSSRTRTRSVELGGAY GQDPALVQQIVDGSWRTDYDWSKCTSYVGRTTCDDVPGLSDFSKRVDVLKGALDAYNQKAQNLFALSGTTSLRLWLLWADAVRQNIRYPMDKAADTARFQ ETFVADAIVGYVREAGAAQKELGSYAGQRQQSMPVSGSEETLTLTLPSAQGFTAIGRMAAPGKRLSIRIEDAGQASLAVGLNTQRIGSTRLWNTRQYDRP RFLKSPDIKLQANQSVALVSPYGGLLQLVYSGATPGQTVTVKVTGAASQPFLDIQPGEDSSQAIADFIQALDADKADWLEIRSGSVEVHAKVEKVRGSID KDYGGDVQRFIRELNEVFIDDAYTLAGFAIPNQAKTPAIQQECAVRGWDCDSETLHKLPGTQHINVDQYAQCGGGCSGNPYDQTWGLNPRGWGESHELGH NLQVNRLKIYGGRSGEISNQIFPLHKDWRVLREFGQNLDDTRVNYRNAYNLIVAGRAEADPLAGVYKRLWEDPGTYALNGERMAFYTQWVHYWADLKNDP LQGWDIWTLLYLHQRQVDKSDWDANKAALGYGTYAQRPGNSGDASSTDGNDNLLLGLSWLTQRDQRPTFALWGIRTSAAAQAQVAAYGFAEQPAFFYANN RTNEYSTVKLLDMSQGSPAWPFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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