Pseudomonas aeruginosa BWH057, V558_04376
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH057 adTyM-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCTTCATGATCTTCATCCCGTTCCTGATCATCGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCC CTGCCGTTCAAGATCATGCTGTTCGTCCTGGTGGATGGCTGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAGCGGTGCCGCCGGC TTGACGCGCCGCTGGCGCGCTGGAGAGAGACATGACCCCTGAGGTGGCACTCGACCTGTTCCGCGAGGCGTTGTGGCTGACGGCGATGATCGTCGGCGTG CTGGTGGTTCCGAGCCTGCTGGTCGGTCTCGTGGTGGCGATGTTCCAGGCCGCCACCCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGATGG TGATCCTGCTCACCCTGATCGTGCTGGGTCCCTGGCTGCTGCGGCAGCTGATGGAATACACCCAGACGCTGATCGGCAACATCCCGCTGCTGATCGGCTG
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| DNA Sequence for Gene |
>V558_04376
ATGCTGGAGCTGACCAACGCGCAGATCGGCGGCTGGATCGCCAGCTTCGTGCTGCCGCTGTTCCGGGTCGCGGCGCTGCTGATGACCATGCCGGTGATCG GCACCCAGCTGGTGCCGGTGCGGGTGCGACTGTACCTGGCGCTGGGCGTCTGCGTGGTGCTGGTGCCGAACCTGCCGTCGATGCCGCAGGTGGACGCGCT GAGCATGAAGGCCATGCTGCTGATCGGCGAGCAGATCCTGGTCGGCGCCTTGCTCGGCTTTTCCCTGCAGTTGTTGTTCCACGCCTTCGTGATCGCCGGG CAGATCATCTCGATGCAGATGGGCCTGGGCTTCGCTTCCATGGTTGACCCGGCCAACGGCGTCTCGGTGCCGGTGCTCGGCCAGTTCTTCACCATGCTGG TGACGCTGCTGTTCCTGGCGATGAACGGACACCTGGTAGTGTTCGAGGTAATCGCCGAGAGCTTCGTCACCCTGCCGGTGGGCGAGGGCCTGAGCGGCAA CCATTTCTGGATCATCGCCGGCAAGCTCGGCTGGGTGATGGGCGCGGCACTGCTGCTGGCGCTGCCGGCGATCACCGCGCTGCTGGTGGTGAACCTCGCC TTCGGCGCCATGACCCGCGCGGCGCCGCAACTGAACATCTTCTCCATCGGCTTTCCGTTGACCCTGGTGCTGGGCCTGGTGATCCTCTGGATCGGCACCG CCGACCTGCTCAGCCAGTACCAGGTGCTGGCCGGCGAGGCCCTGCAATTCCTCCGTGAACTGGTGCGGGCGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGGCCGAGAGCGAGAGCGGGCAGGACAAGACAGAGGAACCCACGGAGAAACGCCGCCGCGAGGCGCGCGAGAAAGGGCAGTTGCCGCGTTCGCGGGA GCTGAACACCCTGGCCATCCTCATGGCCGGCGCCGGCGGCCTGCTGATCTACGGCGCCGACCTGGCGGGCGCCCTGTTGCGCCTGATGCGCAGCAATTTC GAGCTGTCCCGGGAAACCGCGATGAATACCGAGAGCATGCTGCAATTGCTCGGCGCTTCGGCCTACCTGGCTGCCCAGGGGCTCTGGCCGATCCTGCTGA TGCTGCTGGTGGCGGCGATCGTCGGGCCGATCGCCCTCGGCGGCTGGCTGTTCTCGATGGACGCACTGCAACCCAAGTTCAGCCGGCTCAACCCGCTGTC GGGGCTGAAGCGGATGTTTTCCGCCAAGTCGCTGCTCGAACTGAGCAAGGCGCTGATCAAGTTCCTGGTGGTGCTGGCGGTGGCCCTGCTGGTGCTCTCC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MLELTNAQIGGWIASFVLPLFRVAALLMTMPVIGTQLVPVRVRLYLALGVCVVLVPNLPSMPQVDALSMKAMLLIGEQILVGALLGFSLQLLFHAFVIAG QIISMQMGLGFASMVDPANGVSVPVLGQFFTMLVTLLFLAMNGHLVVFEVIAESFVTLPVGEGLSGNHFWIIAGKLGWVMGAALLLALPAITALLVVNLA FGAMTRAAPQLNIFSIGFPLTLVLGLVILWIGTADLLSQYQVLAGEALQFLRELVRAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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