Pseudomonas aeruginosa BWH057, V558_03635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH057 adTyM-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACAACCCCAACATGAAGTTCCTGTTCATCTACGTGGTGCTGTTCCTGGTCGTGCTGCTGGTGCTCTACATCAAGCACCGGCTGACCCGGATGCCGGTCG GGCGCGCCTGGGAGGCGCTGCGCGAGGACGAGATCGCCTGTCGCGCGATGGGCCTCAACCATGTGCTGGTGAAACTCTCGGCGTTCATGCTCGGCGCCTC CACCGCGGGACTGGCCGGGGTGTTCTTCGCCAGCTACCAGGGCTTCGTCAACCCGTCCTCGTTCAACTTCTTCGAGTCGGCGCTGATCCTCGCCATCGTC GTGCTCGGCGGCATGGGCTCGACGGTCGGGGTGGTGATCGCCGCCTTCGTCCTCACCGTGGCGCCGGAGCTGCTGCGCAGCTTCGCCGACATCCGCGTGC TGCTGCTCGGGATACTCATGGTGGTGATGATGATCTGGCGGCCGCGCGGGCTGATCCGCATCAGCCGGGTGGGCTTCGCCCCGCGCAAGGGGGTGGCGCC
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| DNA Sequence for Gene |
>V558_03635
ATGAGCGACAAGATCCTCAGCGTCGAGCACCTGATGATGCACTTCGGCGGCATCAAGGCGCTCAACGACGTCAACCTCGACGTCGAGCGCGGTTCGATCA CCGCGCTGATCGGCCCCAACGGCGCCGGCAAGACCACCGTGTTCAACTGTCTCACCGGCTTCTACAAGGCCACCGGCGGCAACATCCTGCTCAACACCCA GGGGCGCACCACGGACGTCATCCAGGTGCTCGGCGAGCCGTTCCAGCTGGACGACTTCGTCAAGCCGCCGCAACTGGGCAGTCGCCTCTACTACAAGATG TTCGGCGGCACCCACCTGGTGAACCGCGCCGGGCTGGCGCGGACCTTCCAGAACATCCGCCTGTTCAAGGACATGTCGGTGGTGGAGAACCTGCTGGTGG CGCAGCACATGTTCGTCAACCGCAACCTGCTCGCCGGCATCCTCAACACTCCCGGCTATCGCCGCGCCGAGAGTGAGGCGCTGGACCACGCGTTCTACTG GCTGGAGGTGGTCGACCTGGTGGACTGCGCCAACCGCCTGGCCGGCGAGATGTCCTACGGCCAGCAGCGGCGCCTGGAGATCGCCCGGGCCATGTGCACG CGGCCGGAACTCATCTGCCTGGACGAACCGGCCGCCGGCCTCAACCCGGCCGAGACCCACGCCCTGAGCAACATCGTCCGCTACCTGCGCGACCACCACG GGATCACCGTACTGCTGATCGAGCATGACATGGGCATGGTGATGAACATCTCCGACCACATCATCGTACTCGACCACGGCGACGTGATCGCCCGTGGCAA CCCCGAACAGATCCGCCATGACGAGAAGGTGATCGCCGCCTATCTCGGTGCCGACGAAGAGGAGCTGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGGCGTTGCTGGAATTCCGTGAGGTGGACGTGTTCTACGGGCCGATCCAGGCGCTGAAGAAGGTCTCGCTGCAGGTCAACGAGGGCGAGACGGTGAG CCTGATCGGCGCCAACGGCGCGGGCAAGTCGACGCTGTTGATGTCGATCTTCGGCCAGCCGCGTGCGGCGGCCGGGCAGATCCTCTATCGCGGCCAGGAC ATCCGCCAGAAGTCGGCGCACTACGTGGCGTCCAACGGCATCGCGCAGTCGCCGGAAGGACGCCGGGTGTTCCCCGACATGAGCGTCGAGGAAAACCTGC TGATGGGTACCATTCCCATCGGCATGGACCACGCCGAGGAGGACATGCAGCGCATGTTCGAGCTGTTCCCGCGCCTGAAGGAGCGGCGCAACCAGCGCGC CATGACCATGTCCGGCGGCGAGCAGCAGATGCTCGCCATCGCCCGCGCGCTGATGAGCCGGCCGAAGTTGCTGTTGCTCGACGAGCCCTCCCTGGGCCTG
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| Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MSDKILSVEHLMMHFGGIKALNDVNLDVERGSITALIGPNGAGKTTVFNCLTGFYKATGGNILLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKM FGGTHLVNRAGLARTFQNIRLFKDMSVVENLLVAQHMFVNRNLLAGILNTPGYRRAESEALDHAFYWLEVVDLVDCANRLAGEMSYGQQRRLEIARAMCT RPELICLDEPAAGLNPAETHALSNIVRYLRDHHGITVLLIEHDMGMVMNISDHIIVLDHGDVIARGNPEQIRHDEKVIAAYLGADEEELS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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