Pseudomonas aeruginosa BWH057, V558_00488
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH057 adTyM-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGGTGCAACCGGGTGACCCTGCGTAGCGCCGAGCTGGCGCGAGAGAACGAGCCGGGCATTCACATTGGGCGGATCAGCCCCACGCCGCTGCTGATGA TCGTTGCCGACCGGGACCTGCTTACGCCCACGGACCTTTGCCTGGAGGCCTACCAGCGGGCGTTGCCGCCCAAGCGGCTGCTGATGCTCGCCGGCGGCCA TTTCACGCCGTACATCGAGCATTTCGACGCCACCAGCCAGGCCGCGGCAGACTGGTTCGTCCGTCATCTCGGAGAGGGCGTCGAGCAATCAGCGACGGTC GTCGAATAAATCGGCAAGCGCTGAACGAGCGTTCGCCTCGACGGTCTATCGGGCTCTTGGTTCGGCCTGCGCAGTGACAGGCCCGCCGAATCGCAGGATA ATGCCGGCTATTTTCTCCGCGCCATGCCGCCATGGCCGGAAACGCGTGATGACGGGGCCGACGGGCCCCGTCAGAGCCTGGCAACCCAGGAGTGTCCGGA
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| DNA Sequence for Gene |
>V558_00488
TTGATCGTTTTCCGTTATTTGTCCCGTGAAGTGCTGGTCACCATGAGCGCCGTCAGCGCCGTGCTGCTGGTGATCATCATGAGTGGCCGTTTCATCAAGT ACCTGGCGCAAGCGGCGCAGGGGTTGCTCGACCCCGGTTCGCTGTTCCTGATCATGGCGTTCCGGATTCCCGGCTTCCTGCAGCTGATCCTGCCGCTTGG CCTGTTCCTCGGCATCCTCCTGGCCTACGGGCGGCTCTACCTGGAAAGCGAGATGACCGTGCTCTCGGCGACCGGCATGAGCCAGAAGCGCCTGCTCGGC TACACCATGGCGCCGGCGCTGCTGGTGGCGATCCTGGTGGCCTGGCTGAGCCTGTTCCTGGCGCCCCAGGGCATCAACCAGTTCGCCCTGCTGTTGAACA AGCAGGACACCCTGACCGAGTTCGACACCCTGGTCCCGGGCCGTTTCCAGGCAATGCGCGACGGTACCCGGGTGACCTATACCGAGGAACTGTCGAAGGA TCGCGGCGAACTGGCCGGCATCTTCATCTCGCAGAAGGACCTCAACAGCAGCAACCAGGAACGCGGCATCTCCATCCTGGTGGCGGAGAAGGGCACCCAG AACATCCAGGCGGATGGCAGCCGTTACCTGATCCTGCACAATGGCTACCGCTACGACGGTAATCCCGGGCAGGCCAACTACCGGGCGATCCAGTACGACA CCTATGGCGTGATGCTGCCCAAGCCCGAGGCCAGCAGCGAGGTGAGCGAGCGCGACGCGGTGCCCACCGCCGACCTGTTCGGCAGCGACAACCCACGCTA CCAGGCCGAATTGCAGTGGCGCCTGTCGACCCCGCTGCTGGTGTTCGTGGTGACCCTGTTGGCGGTGCCGCTGTCGCGGGTCAACCCACGCCAGGGGCGC TTCCTCAAGCTGCTGCCGGCGATCCTCCTTTATATGGGCTACCTGGCCCTGCTGATCGCTGTCCGTGGCCAGTTGGACAAAGGCAAGATCCCCATGGCCA TCGGCCTGTGGTGGGTCCACGGACTATTCCTGGCGATCGGTCTTCTTCTGTTCTATTGGGAACCCTTGCGCCTGAAGCTGGCGTCCTCCCGTGCCGGTCG CGAGGTGGCGCATGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCGATCGTTACATCGGTGTCACCGTCTTCGTCGCGATCCTCGCGGTGCTCGGGGTGATCCTCGGCCTGGCGCTGCTGTTCGCCTTCATCGACGAACTC AACGACATCAGCGCCAGCTACGGCATTGGCGATGCCCTGCGCTTCATCTTCCTCACCGCGCCACGGCGCGCCTACGACATGCTGCCGATGGCGGCGCTGA TCGGCTGCCTGGTCGGCCTCGGCACCCTGGCCAGCAACAGCGAACTGACCATCATGCGCGCGGCCGGGGTATCCCTGTCGCGGATCGTCTGGGCGGTGAT GAAACCGATGCTGGTGCTGATGCTGGCCGGCATCCTGGTTGGCGAGTACGTCGCGCCCTGGACCGAGAACATCGCCCAGAGCGGCCGCGCCCTGGCCCAG GGCGGCGGCGATTCGCAAAGCTCCAAGCGCGGTCTGTGGCATCGCCAGGGGCGCGAGTACATCCACATCAACGCGGTGCAGCCCAATGGCGTGCTGTACG
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| Amino Acid Sequence |
>permease
MIVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLG YTMAPALLVAILVAWLSLFLAPQGINQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSSNQERGISILVAEKGTQ NIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEASSEVSERDAVPTADLFGSDNPRYQAELQWRLSTPLLVFVVTLLAVPLSRVNPRQGR FLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYWEPLRLKLASSRAGREVAHG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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