Pseudomonas aeruginosa BWH056, V557_05931
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH056 adTwB-supercont1.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGCCCAGCACAGCAACGGCCTGCTCAGCCGCTGGCGGCCGACCCTGCTGGAAGATCATCCGTTGCCCGGTCCGCCGGGGCGCGGCGCGATCTTCGTGC GCTTTGGCGAAGGCGCCGACGCGCTGGTGGTAGTGATGATGCATCTCGCTCTCGGCGCTCGCACCCGCACTCGCCAGCTCGCCTATATCCGCGAGCTGAT TGGCGACTACCGCCACCAGGTGCTGATGGGCGACATGAACACCCACGCCGTCGATCTTCTGGAAAACTCGCCCCTGCGCGACCTCGGCCTGATGGCGCCG CAGGTCGAGGCGACGTTTCCCAGCTGGCGGCCGCAGCGCAATCTCGACCATATCCTGCTCAGTTCCGATCTCGCTCTCGAGCGGGTCGACGTGCTCGACC AGCCGATCTCCGACCATCTGCCGGTATCGGTGGAGATTCGCCTGCCGGACAACCTGCGCGACAAGGCCTTGGTCGTGCGCGGGGATGCCGGGAGTCCGCC
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| DNA Sequence for Gene |
>V557_05931
ATGAGTCGCGACGACGTCCAGCGCTGGAAAGACAAGTACCTGGAGAACATCGAGCAGCAGGAGCGCCTGCAACGGCGCTGGGATGCCCGCATCGACCTGC TGCGTCGCGGCCTGGTGCGTAGCAGTCTGGCGGCCGAAGGCAGCGACAAGGCGGTCGACCAGTGCATGAAGGAGCTGCGCGAGATCCTCCGTCGCGACGA CATGGACGCCGGCCTGTCGGGCCTGATTCCGCGCCTGGAAAAGGCCGTGCTCGACTCCGAACAACGCCGCCAGCAACGCACCCAGCAGAACATCGATGCT CTCGGCGAACTGGCCCAGCAGTTGCTGGCCCTGGACCTGCCGCGGGAACTGCGCAAGCCGCTGAAGCAGTTCGCCCGCGATATCGAGGAGCGCGCCCGGC AGTCGCGCGAGATTCCGATCCTGCTCAGCGAGCTGAGCAGGCTGCAACGCCAGGCGCTGGCCGAGCGCAAGGGCGGCGATGCCGAAGACGGTCGCCCGAG CCTGTTGCAACGCCTGTTCGGCGGCAAGGAGTCGGAAACCACCGCGGAGCCGAGCGCATCGGTGCCGTCCGTTGTGGCGGCAAGCAATACACCGATCCAA CCGGCGGCGGCCGCGCCGTCCCTGCCGGTCGCCGAGCACGACGAGGCGCCAGGCGGTCCGCCGCAGCCGTTGCCCGCCCGCACGGTCGCCGCCATCGAAA GCGCGCCAGCGGGTTGGGTCGGGGTCGCCGAGCGTGGCGAGCCGAACCAGATCCTGCTGGATGAGCCCCGGGAAATCTGGCTCGACAGCCTGCCGCTACC GGCCGGCCTGAGCTTTAGCGAGACGCTGGAAGAAGCGGGTGCGGAGCCGTCGCCCGCAATGCCGGCGGACGTTGAAAGCGCGCCCGAAGCTCCGGCCACT CCTGTGGATAACCTCGACGGGCAGGCGGTAGACGAGGCCTACGAACTGCCGCCGCCGATACCGGAGCCCGGCTACAGCGCGGTGGCGCCGCACATCGAGG CCAGCCTGCTGCGGCTGCTCGACGGTCTGTCCCTGCCGAGCAGCCACCAGCCCCAGGCCGAGGCGCTGCGGGAGCGGATCGATGGCAGCCTGAACTGGTA TGAGCTGGTGCCGGTACTCGACGACCTGGCGGTGCTGGTGCTGTCCCTGGCGGACAGTGGCCAGCGCGACTTCGAGGAATACCTGCGGCAACTCAACGAG CGCCTGGAAAGCTTCCTCGGCCACCTGGGCGACGCCCACGCCGGCTATACCGACGTGCTGGACAACGCGCGCGGCTTCGACCAATCGCTGCGTGAGCAGG TCAGTGGCCTGCAGGCCAGCGTGCAGCAGGCGACCGACCTGAACAGCCTCAAGCTGGCGGTGGACAGCCGGCTGAACGGCCTGCTTGCCTCCATGGACGA ACACCAGCGCGAACAGGCCGAGCACGAACAGGAGGTGTCCGGCCGCCTGCAGGCGCTGATGGAGCGGGTCAACAGCATGGAGCAGGATGCCAAGGCGTTC CACAGCCACCTGGAGGACCAGCGACAGAAAGCCCTGACCGATCCGCTGACCGGCCTGCCCAACCGCGCGGCGCTCAGCGAGCGCCTGGAACAGGAAGTGA CGCGCCGGCACCGGGACGGCGGCGATCTGCTGCTGGCGGTGCTGGACATCGACCACTTCAAGCGGATCAACGACGACTTCGGCCACCTGGCCGGGGACAA GGTGCTGAAGATCATTGCCGGCGAATTGCGCAAACGGTTGCGGCAGGCCGATTTCATCGCCCGTTTCGGCGGCGAGGAGTTCGTCGTCCTGCTCCCGGCC ACGTCCCTGGAAGCCGGCCGGCAACTGCTCGAACGGCTGCGCGCGGCGATCGCCGCCTGTCCGTTCCATTTCAAGGGCGAGCCCCTGAGCATCACCTGTT CCGCCGGCATCACCGCGTTCGAAGGCAACGAGGCCGGCGAAGCGGTTTTCGAGCGTGCCGACCAGGCGCTGTATCGAGCCAAGCGCGCCGGCCGGGACCG CCTGGAAGTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGGCGACCAGCGCACATTCCGACGACTCGGGACGGGCTCGCCTGCAGGTGTTGCCGCGGCTCGCTAGAATGGTCCCGCCCGGTAGAATGACCGGCTGTC CCGCTCTGGAAACTCCCATGGATATGTTCGGCGTCGCCGTCCTGATCTTTCTGGTCACCGACCCCTTCGGCAACATCGCCGTGTTCCTCGCCGCGCTGAA AGGCGTCGCACCTGGGCGCCGCCTGCGCGTGGCGTTTCGCGAGCTGGCCTTCGCCCTGGGCCTGCTGCTGCTCTTCCTCACCCTCGGCGAGCACATCCTC AGCGGCCTCGGCCTGTCCCGCGAGGCGACCGGGATCGCGGGTGGCATCATCCTGTTCGTGATCGCCATGCGCCTGATCTTCCCGTCGCCCCAAGGGCTGC TCGGCGAAGTGCCCGACGGCGAGCCGCTGCTGGTACCCCTGGCCACCCCGGCGGTGGCCGGGCCCTCGGCGCTGGCGATGCTGATCACCCTGCGCACCAC
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| Amino Acid Sequence |
>diguanylate cyclase
MSRDDVQRWKDKYLENIEQQERLQRRWDARIDLLRRGLVRSSLAAEGSDKAVDQCMKELREILRRDDMDAGLSGLIPRLEKAVLDSEQRRQQRTQQNIDA LGELAQQLLALDLPRELRKPLKQFARDIEERARQSREIPILLSELSRLQRQALAERKGGDAEDGRPSLLQRLFGGKESETTAEPSASVPSVVAASNTPIQ PAAAAPSLPVAEHDEAPGGPPQPLPARTVAAIESAPAGWVGVAERGEPNQILLDEPREIWLDSLPLPAGLSFSETLEEAGAEPSPAMPADVESAPEAPAT PVDNLDGQAVDEAYELPPPIPEPGYSAVAPHIEASLLRLLDGLSLPSSHQPQAEALRERIDGSLNWYELVPVLDDLAVLVLSLADSGQRDFEEYLRQLNE RLESFLGHLGDAHAGYTDVLDNARGFDQSLREQVSGLQASVQQATDLNSLKLAVDSRLNGLLASMDEHQREQAEHEQEVSGRLQALMERVNSMEQDAKAF HSHLEDQRQKALTDPLTGLPNRAALSERLEQEVTRRHRDGGDLLLAVLDIDHFKRINDDFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPA TSLEAGRQLLERLRAAIAACPFHFKGEPLSITCSAGITAFEGNEAGEAVFERADQALYRAKRAGRDRLEVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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