Pseudomonas aeruginosa BWH056, V557_05878
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH056 adTwB-supercont1.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGCATCGCTTCCGGGCTGGAGCTGTCGGTCAAGCAGGACGACATCGTCCATCGCGGCTACGCCCTGCAGTTCCGCATCAACGCCGAGGACCCGAAGAA CAACTTCCTGCCCTCGTTCGGCAAGATCACCCGCTACTACGCCCCCGGCGGCCCCGGCGTGCGTACCGACACGGCGATCTACACCGGCTACACCATCCCG CCGTACTACGACTCGATGTGCCTGAAGCTGATCGTCTGGGCGCTGACCTGGGAAGAGGCCCTCGATCGCGGCCTGCGCGCCCTCGACGACATGCGCGTGC AAGGGGTCAAGACCACCGCGCCGTACTACCAGGAAATCCTCCGCAACCCGGAATTCCGCAGCGGCCAGTTCAACACCAGCTTCGTCGAAAGCCACCCGGA ACTGACCCAGTACTCGATCAAGCGCAACCCGTCGCACCTGGCCATCGCCATCGCCACCGCCATCGCGGCCCACGCCGGCCTGTAAGGGAAGGAGCAGAAC
|
|
| DNA Sequence for Gene |
>V557_05878
ATGAGCAACACCATCCAAGCGAAGAAGACCGGCGTCACCGATACCATCCTGCGCGATGCCCACCAGTCGCTGCTGGCGACCCGCATGCGCACCGAGGACA TGCTGCCGATCTGCGACAAGCTCGACCGCGTCGGCTACTGGTCGCTGGAAGTCTGGGGCGGCGCCACCTTCGACGCCTGCGTGCGCTTCCTCAAGGAAGA CCCGTGGGAACGCCTGCGCAAGCTCAAGGCGGCGCTGCCCAACACCCGCCTGCAGATGCTCCTGCGCGGGCAGAACCTGCTCGGCTACCGCCACTACAGC GACGATGTGGTGCGCGCCTTCGTGGCCAAGGCGGCGGTCAACGGCATCGACGTGTTCCGCATCTTCGACGCGATGAACGACGTGCGTAACCTGCGCGTCT CCATCGAGGCGGTGAAGGCCGCCGGCAAGCACGCCCAGGGCACGATCTGCTACACCACCAGCCCGGTGCACACCATCGAGGCCTTCGTCGCCCAGGGCAA GGCGATGGCCGACATGGGCGTCGACTCCATCGCCATCAAGGACATGGCCGGCCTGCTCACCCCCTATGCCACCGGCGACCTGGTCAAGGCCCTGAAGGAC GCCCTGCCGCTGGACGTGGTGGTGCATTCCCATGACACCGCCGGTGTCGCCAGCATGTGCCAGCTCAAGGCCGTGGAAAACGGCGCCGACCGTATCGACA CGGCGATCTCCAGCATGGCCTGGGGCACCAGCCACCCGGGCACCGAGTCGATGGTCGCGGCGCTGCGCGGTACCCCCTACGACACCGGCCTGGACCTGGA GCTGATCCAGGAGATCGGCATGTACTTCCACGCGGTGCGCAAGAAGTACCACCAGTTCGAGAGCGAATTCACCGGCGTGGATACCCGCGTGCAGGTCAAC CAGGTGCCGGGCGGGATGATTTCCAACCTGGCCAACCAGCTCAAGGAGCAGGGCGCGCTGAACCGTATGGGCGAGGTGCTCGAGGAAATCCCGCGGGTCC GCGCCGACCTCGGTTTCCCGCCGCTGGTGACGCCGACTTCGCAGATCGTCGGCACCCAGGCGTTCTTCAACGTGCTCGCCGGCGAGCGCTACAAGACCAT CACCAACGAAGTGAAGCTGTACCTGCAGGGCCGTTATGGCAAGGCCCCCGGCGAGGTCAACGAGCAACTGCGGCGCCAGGCCATCGGCAGCGAGGAAGTC ATCGACGTGCGCCCGGCCGACCTGATCAAGCCGGAGCTGAACAAGCTGCGCAGCGAGATCGGCAACCTGGCCAAGTCCGAGGAAGACGTACTCACCTACG CGATGTTCCCGGACATCGGGCGCAAGTTCCTCGAAGAGCGTGAGGCCGGCACCCTGAAGCCCGAGGAACTGCTGCCGATTCCCACCGGCAAGGGCGTCGC CGCCGCTGGCGCGGAAGGCACCCCGACCGAGTTCGTCATCGACGTGCACGGCGAGACCTACCGCGTCGACATCACCGGGGTCGGCGTGAAGAGCGACAAC AAGCGGCACTTCTACCTGTCCATCGACGGCATGCCGGAAGAAGTGGTGTTCGAGCCGCTCAACGAATATGTCGCCGGCTCCGCCAGCGGCCGCAAGCATG CCAGCGAGCCGGGCCACGTCAGCACCACCATGCCGGGCAACATCGTCGACGTGCTGGTGAAGGAAGGCGATAGCGTCAAGGCCGGCCAGGCGGTGTTGAT CACCGAGGCGATGAAGATGGAAACCGAGGTCCAGGCCGGCATCGCCGGTACGGTCAAGGCGATCCACGTGGCCAAGGGCGACCGGGTCAACCCGGGCGAG ATCCTGATCGAGATTGCGGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCGACAGACGGTTAAAGTCCCTGGGGGAGCATGATGCTCCCCTTTTTTTATCGGCATCGGTTGCCGCGTCGGCCGGCTGTTCGCCCTGCCAGGGTGCG CCCGGCGCGCGCGCCGCCTAGAATGCCGCCTCTGCCCAACGGCGCGTCGCGCCGCAGGCGCTGACTATCGGGAAGTCCAGGTGTCGTCCTCTCCAGCTCA AACGCCCAGCCGCCGGCCCTCGCTGCTCGGCGGTTCGATGATCATCGCCGGCACCGCCGTCGGCGCCGGAATGTTCTCCCTGCCCATCGCCATGTCCGGC ATCTGGTTCGGCTGGTCGGTGGCGGTGTTCCTGCTCACCTGGTTCTGCATGCTGCTGTCGGGGATGATGATCCTCGAGGCCAACCTCAACTACCCGGTGG GCTCGAGCTTCTCGACCATCACCCGTGACCTGCTCGGCCAGGGCTGGAATGTGGTCAACGGGCTGAGCATCGCCTTCGTCCTCTATATCCTCACCTATGC
|
|
| Amino Acid Sequence |
>pyruvate carboxylase
MSNTIQAKKTGVTDTILRDAHQSLLATRMRTEDMLPICDKLDRVGYWSLEVWGGATFDACVRFLKEDPWERLRKLKAALPNTRLQMLLRGQNLLGYRHYS DDVVRAFVAKAAVNGIDVFRIFDAMNDVRNLRVSIEAVKAAGKHAQGTICYTTSPVHTIEAFVAQGKAMADMGVDSIAIKDMAGLLTPYATGDLVKALKD ALPLDVVVHSHDTAGVASMCQLKAVENGADRIDTAISSMAWGTSHPGTESMVAALRGTPYDTGLDLELIQEIGMYFHAVRKKYHQFESEFTGVDTRVQVN QVPGGMISNLANQLKEQGALNRMGEVLEEIPRVRADLGFPPLVTPTSQIVGTQAFFNVLAGERYKTITNEVKLYLQGRYGKAPGEVNEQLRRQAIGSEEV IDVRPADLIKPELNKLRSEIGNLAKSEEDVLTYAMFPDIGRKFLEEREAGTLKPEELLPIPTGKGVAAAGAEGTPTEFVIDVHGETYRVDITGVGVKSDN KRHFYLSIDGMPEEVVFEPLNEYVAGSASGRKHASEPGHVSTTMPGNIVDVLVKEGDSVKAGQAVLITEAMKMETEVQAGIAGTVKAIHVAKGDRVNPGE ILIEIAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|