Pseudomonas aeruginosa BWH056, V557_04936
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH056 adTwB-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGGATCTCCATCGCGCGGAATACCCCGGCGCTGTTCCAGATCTACATCCTCTACTTCGGCCTGGGCTCCTTCGGCCTGCACGTCAGTTCCTGGTTC GCCCTGCTCGCCGGGGTCACCTTCAACAACGCCGGCTACCTCGCCGAGTCCTTCCGCGGCGGCCTCCAGGCGGTGCCCGAGACCCAGTTGCGGGCGGCCC GCTCGCTGGGCATGAGCGCGCCGCAGGCCTATCGCCTGGTGGTGATCCCGCAGCTGCTGCGGGTGGTGTTCTACCCGCTGACCAACCAGTTGGTCTGGGC CATGCTGATGACCTCCCTCGGCGTGGTGGTGGGCCTGACCGACGACCTCACCGGCGTCACCCAGGCACTCAACGTCAAGACCTTCCGCACCTTCGAATAC TTCGCCCTGGCCGCCGTCCTCTACTTCGCCATGGCCAAGCTGCTGGTGCTGGCCGCCCGCCTGCTGGGCTGGCGCCTGTTCCGTTACTGAGGGGAATGCC
|
|
| DNA Sequence for Gene |
>V557_04936
GTGTTCACCACCAGCCTCACCGCCAACGACCTGCTGTTCCTCCTGCAAGGCGCCTGGACCACCCTCGCCATCACCGCCATGGCGATGCTGATCGGCACCC TGCTGGGTGTCGTCTTCGGCCTGCTCCGCGCCCTGCTGCCACGCGCCAGCCTGCCGCTGGCGGCGCTGCTCGACGTATTCCGCAGCGTGCCGCTGCTGAT CCAGTTCGTCCTGCTCAATTCCTTCAAGAGCATCCTCGGCCTCGACTGGAGCGCCTTCGCCGTGGCCTGCCTGGTGCTCGGCGTGTACGCCGCCGCCTAC TGCACCGAGGTGGTCCGCGGCGGCGTCCTCTCGGTACCGCCGAGCGTGCGCCGGGCGGCGCGTTCCCTGGGCCTGAGCTATCGCCAGGACCTGTTCCACA TTGTCCTGCCGATGGCCGCCCGGGTGGCCTTCCCCGGTTGGGTCAACCTGACCCTGTCGGTGATGAAGGACACCTCGCTGGTGCTCTGGATCGGCATCGT CGAACTGCTGCGCGCCTCGCAGACCATCGTCACGCGCATCCAGGAACCGCTCTTCGTGCTCTGCATCGCGGGGCTCGTCTATTACCTCATGAGCTGGGTG GTCGCGCGACTCGGCGCCCGGCTGGAACGGAGATGGCAGCAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGAGATCAGCGACGTGCACAAGGCCTACGGCCAGTTCGAGGTGGTCAAGGGTGTCGACCTGAGGGTGGACAAGGGCGAGGTGCTGTCGATCATCGGCGG CTCCGGTTCCGGCAAGTCAACCCTGCTGATGTGCATCAACGGCCTGGAGCCGATCCAGCGCGGCAGCATCCGCGTCGACGGCATCGACGTGCATGCCCGC GGTACCGACCTCAACCGCCTGCGGCGGAAGATCGGCATCGTCTTCCAGCAGTGGAACGCCTTCCCCCACCTGACCGTGCTGGAAAACGTCATGCTCGCGC CGCGCAAGGTGCTCGGCAAGAGCCGCGCCGAAGCCGAGGCGATGGCGCTGAAGCAACTCATCCACGTCGGTCTCGGCGACAAGCTCAAGGTCTTCCCCCA GCGCCTTTCCGGCGGCCAGCAACAGCGCATGGCGATCGCCCGGGCGCTGGCGATGTCGCCGGACTACATGCTGTTCGACGAAGCCACCTCGGCGCTCGAC
|
|
| Amino Acid Sequence |
>amino acid ABC transporter
MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDVFRSVPLLIQFVLLNSFKSILGLDWSAFAVACLVLGVYAAAY CTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWV VARLGARLERRWQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|