Pseudomonas aeruginosa BWH056, V557_04694
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH056 adTwB-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCCCAATCTCTCCGATAACTCACTTTCCTTCACCCTGGGCCGATGGAACGAAACCGTGCGGCGCTCCACCATTGAAAGCGACCAACCAACCATCGC TATCCGCAGGTACGTGTCGTCTCGTATTTGCCCAGCAAACTTCGCTCGGGTGATCTGTGTGGCCGGGGGACCTGTGCTGCGTCGTGTGATAGTGCGCGCC CCATCTTCGGCTGCCTTGCCAATGAAGAACTGTGCAACTTTTTGGTTGATAACGTTGTGGATAGAACGCTAGGGAACAAATACCCAAAGGGTTCCGAGAG AATGCGCAACTTTTTGCAAGCGGTGCGCAAAAAGTTGCACAATTTTCAGTGTTCTTCCCATGAGAATCGCCAGAGAATTTTTGGTTTCCTCCAATAACGC CTTGATGGAAAAGAGTTTCAAGACCAGTGGCACAGTTCTTGTCTAGCACTGGTGCCCCCGGCATGTCGCCTGGGCACTTTCAACGACAAGGAACGTATCC
|
|
| DNA Sequence for Gene |
>V557_04694
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGATTCGGTCGGCAACACCTATCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGTGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC TGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCATAACTGCCAGGACCCGG GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCGACGACTGGCG CTCGCCGGTCGCAGGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTTGACAGGCACACCGGTCGTACACCTGTGCGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCGACTTCGCGAAATCGACACAGAGCCAAAGACTTTCGG CGCCGGCTGAGCAAGAGTAACGTGGCTTGCTCCTCCAATGGATTGGAAAGGAACTGCCCACCCGGAACAGGGAACGATCCATGCGTCAAAGAGACCTGAA ATTCACCTTCGTCGTTGGCGAAGGGAACCTTGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTTTCCGCCTGAGCCTGAAGCTG GCCAGCGACAAGAACGCCATCGATTTCAAGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGCAGGACGGCCGTCCGGCCCGCTACGTCCATGGCA TCGTCAGCCACTTCACCCAAGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCACAGTTGGCGCGCCTGGAGCTGTGCTGCAACTG
|
|
| Amino Acid Sequence |
>hypothetical protein
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYR TSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|