Pseudomonas aeruginosa BWH055, V556_04261
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH055 adTzt-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATCGTCGGTGAGGCGCTGGTTCAGGCGCAGCTCTTCGTTGCAATAGAAGCGGCGCTTGTCCAGGCTGGTGAAATCGAGAAAGCCGAAATCCATCGGC TTCTTGATCTTGTAGGCGTAGGGACCGGTCAACAGGACCCAGGAGATGTGCGTCTCGATGACCTCGAAGCGCTCCACCGGGTGGGGGTAGAGGGCCGGGT TCTGCAGGGCGGCGATCAGGGTCTGGCTCACGGGATATCCTTGCCTCTGAAATATGCGAAAACCCGCATTATGGCGGGAAGGGGTGACAGTGCAAACCTC GCTGGCGGATAGCAACCATTTGCCGGATCGCCGGTCGAATGCGCCGCGCTGCCGCCGCGCCTATCCACCGGGGCCGCGCAGACCGTGGATGCCGCCGATG CGGTGTCTGTCCGCTGTGGATAAAGTACGTATAATGCGCCGCCATGACGCGTCCCCGATCCCCCCGTTCCCGTAACAGCAAAGCACGCCCGGCACCCGGC
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| DNA Sequence for Gene |
>V556_04261
CTGAACAAATGGCTCGGCTGGGCCCTCAAGCTCGGCCTCGTCGGCCTGGTGCTCCTCGCCGGCTTCGCCATCTATCTCGATGCCGTGGTGCAGGAGAAAT TCTCCGGCCGGCGCTGGACCATCCCGGCGAAGGTCTATGCCCGCCCGCTTGAGCTGTTCAACGGCCTGAAGCTGAGCAGGGAAGACTTCCTGCGCGAACT CGACGCCCTCGGCTACCGTCGCGAGCCCAGCGTGAGCGGCCCTGGAACCGTATCGGTGGCGGCCAGCGCGGTCGAACTCAATACCCGTGGCTTCCAGTTC TACGAAGGCGCGGAACCGGCCCAGCGCGTTCGCGTGCGCTTCAACGGCAACTACGTCAGCGGGCTGAGCCAGGCCAACGGCAAGGAACTGGCGGTGGCGC GCCTTGAGCCGCTGCTGATCGGCGGCTTGTATCCGGCGCACCATGAGGATCGCATCCTGGTCAAGCTCGACCAGGTGCCGACCTACCTGATCGACACCCT GGTCGCGGTCGAGGATCGCGACTTCTGGAACCACCATGGTGTGTCGCTGAAGTCCGTGGCGCGGGCGGTGTGGGTCAACACCACGGCCGGCCAGTTGCGC CAGGGCGGCAGCACCCTGACCCAGCAGTTGGTGAAGAACTTCTTCCTGAGCAACGAACGCAGCCTGAGCCGCAAGATCAACGAAGCGATGATGGCGGTGC TGCTGGAGCTGCACTACGACAAGCGCGACATCCTCGAGTCCTATCTCAACGAGGTGTTCCTCGGCCAGGATGGGCAACGAGCGATCCATGGCTTCGGCCT GGCCAGCCAGTATTTCTTCAGCCAGCCGTTGGCCGAGCTCAAGCTCGACCAGGTGGCGCTGCTGGTCGGCATGGTCAAGGGGCCGTCCTACTTCAACCCG CGGCGTTACCCGGATCGTGCGCTGGCGCGGCGCAACCTGGTGCTCGACGTGCTCGCCGAGCAGGGCGTGGCGACCCAGCAGGAAGTCGACGCCGCCAAGC AGCGCCCGCTCGGCGTGACCCGGCAGGGCAGCATGGCCGACAGCTCCTATCCGGCCTTCCTCGACCTGGTCAAGCGCCAGTTGCGCCAGGACTACCGCGA CGAGGACCTGACCGAGGAAGGGCTGCGCATCTTCACCAGCTTCGATCCGATCCTGCAGGAGAAGGCCGAGACCTCCGTCAACGAAACGCTCAAGCGTCTC AGTGGGCGCAAGGGGGTCGACCAGGTCGAGGCGGCGATGGTCGTGACCAATCCGGAAACCGGTGAGATCCAGGCCCTGATCGGCAGTCGCGACCCGCGCT TCGCCGGCTTCAACCGGGCCCTGGACGCGGTGCGGCCGATCGGTTCGCTGATCAAGCCGGCGGTCTACCTGACCGCTCTCGAGCGGCCGAGCAAGTACAC CCTGACCACCTGGGTACAGGACGAGCCCTTCGCGGTGAAAGGCCAGGACGGCCAGGTCTGGCGACCGCAGAACTACGACCGGCGCTCGCATGGCACGATC TTCCTGTACCAGGGCCTGGCAAACTCCTACAACCTGTCCACCGCCAAGCTCGGCCTCGACGTCGGTGTGCCCAACGTGCTGCAGACCGTCGCCCGGCTGG GTATCAACCGTGACTGGCCGGCCTATCCTTCGATGCTGCTGGGCGCCGGTTCGCTTAGTCCGATGGAGGTCGCCACCATGTACCAGACCATCGCCAGCGG CGGCTTCAACACGCCGTTGCGGGGGATCCGCAGCGTCCTCACCGCCGACGGCCAGCCGCTCAAGCGCTATCCGTTCCAGGTCGAACAGCGCTTCGACTCG GGCGCCGTCTACCTGGTGCAGAACGCCATGCAACGGGTCATGCGCGAAGGCACCGGGCGTTCGGTGTACAGTCAATTGCCGTCGTCGCTGACCCTCGCCG GCAAGACCGGCACCAGCAACGACTCGCGCGATAGCTGGTTCTCCGGTTTCGGCGGCGACCTCCAGGCTGTGGTCTGGCTCGGTCGCGACGACAACGGCAA GACGCCGCTTACCGGCGCCACCGGTGCCTTGCAGGTGTGGGCCAGCTTCATGCGCAAGGCGCATCCGCAATCGCTGGAAATGCCGATGCCGGAGAACGTG GTGATGGCCTGGGTCGACGCGCAGACCGGGCAGGGCTCGGCGGCGGATTGCCCGAATGCCGTACAGATGCCCTATATTCGTGGCAGCGAGCCCGCCCAGG GCCCAGGCTGCGGGAGCCAGAACCCCGCCGGCGAGGTGATGGACTGGGTACGTGGCTGGCTGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGAGAGGACCTGACGTGAAGAAGATTTTCGTATTCGCCGCGCTTGCCGGCAGTGCCCTGCTCGCGGGCTGTGCCAGCCCGCAGCACGGGGCGATCCCG GTGGTGGATTCCGGTACTCCGGTTTCCAACCAGGAAAGCGGCGGTTTCCGCATCACCCGTACCCAGGTACCGCGTACCCAGCAAGGCGCCGCCACCCAGG GCATTCCCCAGGGCGGCGACTCCGGCGTGGTGGTGATGGTGCCGCAGGGCGCCAATTCCGCACCGATCCAGACTTTCCCGGCGCAGTCCGGCGCCGCGCC GATCAGCAGCGCTCCGCTCGGCACCGGCACCCAGTACCAGGCTCCGCCCAGCAGCGCCTCCACGCCACCGCTGGGCGACAGCTACAACATGCCGCCCAGC GGCGCCAGTCGTTCCGCGCCCACCGGCATTCCGGCCTCCGGCTCGGCCGGCAGCCTGGCGGCCGACGAGCAGTTGGACGGGCCGGTCCTGGCGATGCTCA
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| Amino Acid Sequence |
>penicillin-binding protein
MNKWLGWALKLGLVGLVLLAGFAIYLDAVVQEKFSGRRWTIPAKVYARPLELFNGLKLSREDFLRELDALGYRREPSVSGPGTVSVAASAVELNTRGFQF YEGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIGGLYPAHHEDRILVKLDQVPTYLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQLR QGGSTLTQQLVKNFFLSNERSLSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLDQVALLVGMVKGPSYFNP RRYPDRALARRNLVLDVLAEQGVATQQEVDAAKQRPLGVTRQGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQEKAETSVNETLKRL SGRKGVDQVEAAMVVTNPETGEIQALIGSRDPRFAGFNRALDAVRPIGSLIKPAVYLTALERPSKYTLTTWVQDEPFAVKGQDGQVWRPQNYDRRSHGTI FLYQGLANSYNLSTAKLGLDVGVPNVLQTVARLGINRDWPAYPSMLLGAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLTADGQPLKRYPFQVEQRFDS GAVYLVQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSNDSRDSWFSGFGGDLQAVVWLGRDDNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENV VMAWVDAQTGQGSAADCPNAVQMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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