Pseudomonas aeruginosa BWH055, V556_03945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH055 adTzt-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGAACGAGCCCCCGCCGGTATAGCAGTTGAACAGCGGCGGGAAGACCTTGAGCGGCAGGGCGGCGGACATGAACAGGGGATGGTTCCACAGGCGCTG CAGCATGGCTTCGCCGATCTCCCGGGCCAGCGGGTGGTCCTGCGGCAGTTGCAGGTTGTGCTTGGCCTTGGCCGATTGGTAGCCGGCGGTCGCCTTGCCG TCGGCCCATTCCGCCTGCTCCAGGGCTGCGCGGATCCGGGAGACTTCCTCGGCGGTGAAGATGGCGGGAATATGCAGCAACATGGCGCTGTCCATGAAGG CGAAATGATTGCCAATGATATTGATTTGCATTGGCCATGTAAAACCGCCAAATGTTCCAGACGAGCGAGATGGGAAAAAATGTAATGAGAAAATTGTAAA GAATGTAAATTCCTGTCGAATGCGAATCCGTAATAATTGATAACAATTCTGATCTGCAATAAATTCCGCGACCTTCACAGCTCCCGGGGAGGGGTTTCGA
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| DNA Sequence for Gene |
>V556_03945
ATGTCGCGTCAGTCCACGGATACCGCCGTTTCTTCGCAACGTCTGCTGGCTTCGGCCATCGGTGTGGCCATCACCGCCATCGCCGCACCGCAGGCAGCCC ACGCCGATGAGGCCGGGCAGAAAAAGACCGACAAGGACCGCGTACTGTCGCTGGATGCGGCCACCATCGTCGGCGAGCAGCAGGACGAAACCACCTACAA CGTCGACCGCTCGGCGTCGAAGAAGTACACCGCGCCGCTGCTGGATACGCCGAAGACCGTCACCGTGATTCCGCAGCAGGTGATCAAGGACACTGGCGCC CTGACCCTGGCCGACGCACTGCGCACCACCCCGGGTATCACCTTCGGCGCGGGCGAGGGCGGCAACCCCGCAGGCGACCGGCCATTCATCCGTGGCTTCA ACGCCGAGAGCGATACGTTCCTCGACGGTATGCGCGACGTCGCCTCGCAAACCCGCGAGGTGTTCAACGTCGAGCAGATCGAGGTCAGCAAGGGCCCGGG CTCGGCCTACACCGGCGCCGGCTCCACCGGTGGCAGCCTGAACCTGATCAGCAAGACCGCCAAGCAGGACAACTTCACCGACGCCGGCTTCACCTGGGGC TCAGACCAGACTCGCCGCACTACTCTCGACGTGAACCGGATGATTGGCGACAACGCCGCCTTCCGCCTCAACCTGATGAAGCACGATGCCCACGTCGCAG GGCGCGACGAAGTCAGCGTCAGCCGCTGGGGCGTGGCTCCGACCGTTACCTTCGGCTTCGACACGCCGACCCGCGCCACCCTGTCCTATTACCATCTCAG CACCGATGACATGCCGGACTACGGCCTGCCGCTGACCAACGTCAACCGCAGCAAAGCCAATCCGAGCAAGCCGGCCTCGGTGGATCGCGATAACTTCTAT GGCCTGAAGGACCGCGACTACCGCAAGAGCACCACCGACAGCGGCACCTTCCGCATCGAGCATGACCTGAACGACAACCTGACCCTGTCGAATAGCACCC GCCTGGTGCGCACGACGCTCGACTACATCGTCAGCAACCCCGACGACAGCCGTGGCAACGTTGCCAACGGCTACGTCTACCGTTCGGCGAAAAGCCGCAA TTCGACCTCGAAGGGCTGGGTCAACCAGACCGACCTGAAGGCCAACTTCGAAACCGGCTTCATCAAGCACACCCTGGTGACCGGCCTGGAGTTCAGCTAC GAGGACGTGCACAACCGTCCGTACGCCATTACTTCCGGTGGCGGCGCCGGCAACACCTGCAATGCACGATTGCTCGCCAGTGGCGACTGCACCAGCCTGA ATCGCCCGACTCCGGGCGACAACTGGACCGGCAGCATCACCGACGGCCTGGCCTATACCGATACCGACACCAAGACCAGCGCGGCTTATGTGTTCGATAC CCTGAAGCTAAGCGAACAATGGGAGCTGAATCTCGGTCTGCGCTACGACGACTTCGATACCAAGTCCAGCGGCTACCAGACGGCTGGCCGCAACGGTCCC GCCGGCTACTTCAAGCGCGAGAACAACAGCCACTTCTGGAACTACCAGACCGGCCTGGTCTACAAACCGGCGCCCAACGGCAGCATCTACCTGGCCTGGT CGACCTCGAGCAACCCCACCGGCGAGACCGGCGGCGAGGGCCAGGCGGATATCAGCGTAGGCAACAACGGGTTGGATCCGGAGCGTAACCGTAACCTCGA ACTGGGTACCAAGTGGGCCTTCTTCGACGATGCTCTGTCGCTGAACGCCGCGCTTTTCCGCACCGACAAGACCAATGCCCGGGTCGCTTCGCCGGATGTC TCCACTCTTCAGGTACTGGACGGCGAGCAGCGGGTGCAGGGCGTCGAGCTGGGCTTCAATGGCAAGCTGACCGAGAAGTGGAAGGTCTTCGGCGGCTACA CCTACCTCGACAGCGAAATCCGCAAGTCGACGGTGAAGAGCGACGAAGGCAACAAGATGCCGCAGACCGCGCAGAACAACTTCACTCTGTGGACCACCTA CGATCTGTTGCAGAACTTCACTATCGGCGGTGGTACCACCTATGTGGACAAGCAGTACGGCAACACTGCGAACTCTACCTATATCCCGTCCTACTGGCGC TATGACGCCATGGCCAGCTACAAGGTGAGCAAGAACGTCGACCTGCAACTGAACGTGCAGAACCTGACCGACAAGCGCTACTTCGACCAGGTCTACAGCA CGCACATGGCCCACGTCGCTCCGGGCCGCACGGCATTGCTCGGGGTGAACTTCCACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCCGCTCTCGCTCCCCACGAAAGCCCCATTCCCCCTGCGGGATGGGGCTTTCCCGCATCCAGGTGGGTAAATAGAGCGTAAAGAACGTTAATTCGGCT TTATCGCAACTGATTATCAAATAGAATTGTCCGCCGACGTCCTCGTGTTGTCTGGCCGGCGCTTGGCGTCGGCGTAGTCCCGTTGTTGCCGCGCGGCGGC CGTGAAGGTGATCCTGTGAAGAAAGTCTGGTTCCAGTTGCATTGGTTCTTCGGTATCAGCGCCGGCCTGGTGCTGGCGCTGATGGGCGTCACCGGAGCGA CCCTGTCGTTCCAGGACGAGCTGATGCGCGCGCTCAACCCTGACGTGCTGGTGGTGCAGAAGCACCCCGAGGGTGTGCTGCCGCTGGACGAACTGGTGCG CCGTATCGAAGGTGCCGAGCCGGGGCGGAAAGTGGCCTTCGTCTGGGTCGAGATGGACAGCGACAAGGCCGGGCGGATCTTCTATACCCCGCCGCCGGGA
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| Amino Acid Sequence |
>TonB-denpendent receptor
MSRQSTDTAVSSQRLLASAIGVAITAIAAPQAAHADEAGQKKTDKDRVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPKTVTVIPQQVIKDTGA LTLADALRTTPGITFGAGEGGNPAGDRPFIRGFNAESDTFLDGMRDVASQTREVFNVEQIEVSKGPGSAYTGAGSTGGSLNLISKTAKQDNFTDAGFTWG SDQTRRTTLDVNRMIGDNAAFRLNLMKHDAHVAGRDEVSVSRWGVAPTVTFGFDTPTRATLSYYHLSTDDMPDYGLPLTNVNRSKANPSKPASVDRDNFY GLKDRDYRKSTTDSGTFRIEHDLNDNLTLSNSTRLVRTTLDYIVSNPDDSRGNVANGYVYRSAKSRNSTSKGWVNQTDLKANFETGFIKHTLVTGLEFSY EDVHNRPYAITSGGGAGNTCNARLLASGDCTSLNRPTPGDNWTGSITDGLAYTDTDTKTSAAYVFDTLKLSEQWELNLGLRYDDFDTKSSGYQTAGRNGP AGYFKRENNSHFWNYQTGLVYKPAPNGSIYLAWSTSSNPTGETGGEGQADISVGNNGLDPERNRNLELGTKWAFFDDALSLNAALFRTDKTNARVASPDV STLQVLDGEQRVQGVELGFNGKLTEKWKVFGGYTYLDSEIRKSTVKSDEGNKMPQTAQNNFTLWTTYDLLQNFTIGGGTTYVDKQYGNTANSTYIPSYWR YDAMASYKVSKNVDLQLNVQNLTDKRYFDQVYSTHMAHVAPGRTALLGVNFHF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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