Pseudomonas aeruginosa BWH055, V556_RS0106365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH055 adTzt-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCAACCGGTTGATCCGGGCTTCCAGCTCCTGGATCTTTTGCTGCTCAGGCGTCAACGCCTTGCTCTTCGGGGTCACACCCTGGCGCTCCGCCTCGAGC TGCTTCACCCAACGGCGCAAGGCCGAATCCACCACCCCCAGCGAACGGCAGGCGTCGATATGGCTGTAGCCTTGGTCCAACACCAGGGCCGCGGCCTCTC GTTTGAACTCGGCGGAAAACGTACGTCGTTGCTTGCTCATCAGACACCTCTCTCACGGCGAGGATTTTCGCCTAAATCGGTGTCCGGGATCAGTAGACCA CTACATTCAGGTGTTTGCGCGGACTGAGCAGTCGCTGCCGAAACAGTTATTTTTGTTGCTAAGAGGCAGGAAGGCTGCGCTGAGATTCCTGCTAGTAAAT TAGATAGTTGTTGTCTTCTGAAACAGAATTGAAGCGAAATTGGGGGTAGGTTTTTTCTAGGTGAAGGGTAACTATTTAGAATTACAAAGGTGTGACGCAA
|
|
| DNA Sequence for Gene |
>V556_RS0106365
ATGTTGTATTTTTCTTGCGGTATGAAGATGGGTGGTTGGGTCGGATATAGGTACTTCTCTCTATTTTCTTTAATTGCTCTTATCTATGGGTGTGTCGGTG GTGGAGGTGGATCGGATGAGATTGGGCAGCACTGCTTTGAGAGAGAGCAAAAGCTTTCCGGAGTTAATGATAATGAAGAGGGGAGTGTGAGGTTGAATCG GCTGAACTGCGATCCAATTGAAGGTCGTGTTCTTGAATCAGAGAAGCTGATACGAAAGCCGCCCAATGAGCTGGGTATTCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATGAATAATTTTTAGCCTGGAGAGGTCTTTTTGAAAATGAAAAAATCACTTGTTATGTCGACTGTGCTTTTGGTGGCTAGCAATTTCGCGTGTGCTGATG AGGGCTCAAATGATGGAAGTGAGATATGTCGGGCGCAGGGTGGAGTTGAAATAACAAGTCTGGGGGAAGTCTCAAAGGGTGTGGATGTTGAAGATGTTGT AGTTTGTTCGATTCTTCCAAGTAATATGAAGTCGAGTCAAAGAGCGCCTACACTCCCTCCTCTGCAAAGGATGATCATTTCGGCAATGCCTTCACCAGGA ACGGTCACTGTTTCTGCCAGCGGAGATAGGAAGTTCACAACATCTTGCCGGGCAAATCTTTATGCTCCACGTTATGCCAATTTCTATCCAGACGGTGTTA GCAGGGGAACATCAGATCTACGATGTGTTGGTTACAATACACCCGGGAATTCATCTCAAGGGTGTAATGTGTCATGGGTCGGCCCGACCGAAATTCAATT
|
|
| Amino Acid Sequence |
>hypothetical protein
MLYFSCGMKMGGWVGYRYFSLFSLIALIYGCVGGGGGSDEIGQHCFEREQKLSGVNDNEEGSVRLNRLNCDPIEGRVLESEKLIRKPPNELGIH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|