Pseudomonas aeruginosa BWH055, V556_03090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH055 adTzt-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGGATCTCCATCGCGCGGAATACCCCGGCGCTGTTCCAGATCTACATCCTCTACTTCGGCCTGGGCTCCTTCGGCCTGCACGTCAGTTCCTGGTTC GCCCTGCTCGCCGGGGTCACCTTCAACAACGCCGGCTACCTCGCCGAGACCTTCCGCGGCGGCCTCCAGGCGGTGCCCGAGACCCAGTTGCGGGCGGCCC GCTCGCTGGGCATGAGCGCTCCGCAGGCCTATCGCCTGGTGGTGATCCCGCAGCTGCTGCGGGTGGTGTTCTACCCGCTGACCAACCAGTTGGTCTGGGC CATGCTGATGACCTCCCTCGGCGTGGTGGTGGGCCTGACCGACGACCTCACCGGCGTCACCCAGGCACTCAACGTCAAGACCTTCCGCACCTTCGAATAC TTCGCCCTGGCCGCCGTCCTCTACTTCGCCATGGCCAAGCTGCTGGTGCTGGCCGCCCGCCTGCTGGGCTGGCGCCTGTTCCGTTACTGAGGGGAATGCC
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| DNA Sequence for Gene |
>V556_03090
GTGTTCACCACCAGCCTCACCGCCAACGACCTGCTGTTCCTCCTGCAAGGCGCCTGGACCACCCTCGCCATCACCGCCATGGCGATGCTGATCGGCACCC TGCTGGGTGTCGTCTTCGGCCTGCTCCGCGCCCTGCTGCCACGCGCCAGCCTGCCGCTGGCGGCGCTGCTCGACGTATTCCGCAGCGTGCCGCTGCTGAT CCAGTTCGTCCTGCTCAATTCCTTCAAGAGCATCCTCGGCCTCGACTGGAGCGCCTTCGCCGTGGCCTGCCTGGTGCTCGGCGTGTACGCCGCCGCCTAC TGCACCGAGGTGGTCCGCGGCGGCGTCCTCTCGGTACCGCCGAGCGTGCGCCGGGCGGCGCGTTCGCTGGGCCTGAGCTATCGCCAGGACCTGTTCCACA TCGTCCTGCCGATGGCCGCCCGGGTGGCCTTCCCCGGTTGGGTCAACCTGACCCTGTCGGTGATGAAGGACACCTCGCTGGTGCTCTGGATCGGCATCGT CGAACTGCTGCGCGCCTCGCAGACCATCGTCACGCGCATCCAGGAACCGCTCTTCGTGCTCTGCATCGCGGGGCTCGTCTATTACCTCATGAGCTGGGTG GTCGCGCGACTCGGCGCCCGGCTGGAACGGAGATGGCAGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGAGATCAGCGACGTGCACAAGGCCTACGGCCAGTTCGAGGTGGTCAAGGGTGTCGACCTGAGGGTGGACAAGGGCGAGGTGCTGTCGATCATCGGCGG CTCCGGTTCCGGCAAGTCGACCCTGCTGATGTGCATCAACGGCCTGGAGCCGATCCAGCGCGGCAGCATCCGCGTCGACGGCATCGACGTGCATGCCCGC GGTACCGACCTCAACCGCCTGCGGCGGAAGATCGGCATCGTCTTCCAGCAGTGGAACGCCTTCCCCCACCTGACCGTGCTGGAAAACGTCATGCTCGCGC CGCGCAAGGTGCTCGGCAAGAGCCGCGCCGAAGCCGAGGCGATGGCGCTGAAGCAACTCACCCACGTCGGTCTCGGCGACAAGCTCAAGGTCTTCCCCCA GCGCCTTTCCGGCGGCCAGCAACAGCGCATGGCGATCGCCCGGGCGCTGGCGATGTCGCCGGACTACATGCTGTTCGACGAAGCCACCTCGGCGCTCGAC
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| Amino Acid Sequence |
>amino acid ABC transporter
MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDVFRSVPLLIQFVLLNSFKSILGLDWSAFAVACLVLGVYAAAY CTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWV VARLGARLERRWQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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