Pseudomonas aeruginosa BWH055, V556_00544

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00702	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00702	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00702	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.2090.10	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	715	803	0.0
Gene3D	G3DSA:3.30.70.1320	Multidrug efflux transporter AcrB pore domain like	-	-	138	327	0.0
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	40	58	3.0E-23
Pfam	PF00873	AcrB/AcrD/AcrF family	IPR001036	Acriflavin resistance protein	7	1013	0.0
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	547	564	3.0E-23
Gene3D	G3DSA:3.30.70.1430	Multidrug efflux transporter AcrB pore domain	-	-	565	663	0.0
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	386	410	3.0E-23
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	439	462	3.0E-23
SUPERFAMILY	SSF82866	Multidrug efflux transporter AcrB transmembrane domain	-	-	301	490	2.22E-36
Gene3D	G3DSA:3.30.2090.10	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	182	274	0.0
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	566	659	7.59E-5
Gene3D	G3DSA:1.20.1640.10	Multidrug efflux transporter AcrB transmembrane domain	-	-	502	1012	0.0
Gene3D	G3DSA:3.30.70.1440	Multidrug efflux transporter AcrB pore domain	-	-	664	865	0.0
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	140	325	3.14E-17
SUPERFAMILY	SSF82866	Multidrug efflux transporter AcrB transmembrane domain	-	-	796	1020	3.79E-47
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	358	379	3.0E-23
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	464	487	3.0E-23
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	42	136	1.83E-19
SUPERFAMILY	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	714	800	2.75E-14
SUPERFAMILY	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	187	267	1.7E-11
Gene3D	G3DSA:3.30.70.1430	Multidrug efflux transporter AcrB pore domain	-	-	42	811	0.0
PANTHER	PTHR32063	-	IPR001036	Acriflavin resistance protein	1	1022	0.0
Gene3D	G3DSA:1.20.1640.10	Multidrug efflux transporter AcrB transmembrane domain	-	-	14	501	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.