Strain | Pseudomonas aeruginosa BWH055 adTzt-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTTCCCGCGGACCATCCCGCAGGCCGAAGCGCTGAAGGACGCCGGTGTGACCATCGACCACGTGGTCGAGATCGCCGTCGACGACGAGGAGATCGTG TCGCGTATCGCTGGTCGTCGCGTGCATCCGGCCTCCGGCCGCGTGTACCACACCGAGCACAACCCGCCGAAGGTCGCCGGCAAGGACGACGTTACCGGCG AAGAGCTGATCCAGCGCGAGGACGACAAGGAAGAGACCGTGCGTCACCGCCTGTCGGTCTATCATTCGCAGACCAAGCCGCTGGTCGACTTCTACCAGAA GCTGTCGGCCGCCGAAGGCACCCCGAAATACCACAGCATCGCCGGCGTCGGCTCGGTCGAGCAGATCACCGCGAAAGTGCTTTCGGCCCTGAGCTGATCC GCAGCGCTGTAGCACCGACGGCCCGCTTGCGGGCCGTCGGCGTTTCCGGGGCGGCGAAGGCTGGTACAATCGGCGTCTTTTTCACCACGCGGAACCGTCG
|
|
DNA Sequence for Gene |
>V556_00535
ATGTCCACTCTGTTGGCCCTGGATACCTCCACCGAAGCCTGCTCCGTCGCCCTGCTCCACGAGGGGCGGGCGCTCAGTCACTACGAGGTGATCCCGCGCC TGCACGCCCAGCGCCTGCTGCCGATGGTCCGCGACCTGCTCGACGAGGCCGGCGTCGCCCTGTCCGCGGTGGACGCCATCGCCTTCGGGCGCGGTCCGGG CGCCTTCACCGGCGTGCGCATCGCCATCGGCGTGGTCCAGGGCCTGGCCTTCGCCCTGCAGCGCCCGGTACTGGCGGTCTCCGACCTGGCGATCCTGGCC CAGCGGGCCTACCGCGAGCAGGGTGCGGAGCGGGTCGCTGCGGCCATCGACGCGCGGATGGACGAGGTCTACTGGGGTTGCTACCAGTTGCAACAGGGCG AGATGCGCCTGGCCGGCAGCGAAGCGGTACTGCCGCCCGAGCGGGTCGCCGTACCGTGGGACGCCGCTGCCGCGGACTGGTTCGGCGCCGGCACCGGCTG GGGCTACGTCGAGCGCATGCCGCAGCGCCCGGTCGCGCTGGACGCGAGCCTGCTGCCGCATGCCGAGGACTTGCTCAGCCTGGCCGGCTTCGCCTGGGCG CGCGGCGAAGGCGTGGAGGCGGAACAGGCGCTGCCGGTGTACCTGCGCGACAACGTGGCGACGCCGAAAAAAGCGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAATGCCGCGCAGCGGTAATTGCCAAGCCTTTCGGGGCTGGCTAGAGTGTGGAGACTTCCCCGGGTTTTGATCATGCGTATCGACGGACTTTCTTCCTCT TCGTTGCCGCTGGAGCGCAGCGCCCGACCGGGCTCCGCGGTCACGCCGTATCGCGACGTGCAGCGCGAGGTCGAGGCGCGGCGCGAGCAGCCGGCGCCGG TTTCCGGCAGCCAGGGCTTCGAGCAGGCGCCGCAGGCGCGCAAGGTCCAGGCCAGTTCGGCGGGCGGCGACAGCCTGCCGGTGAGCGCCCGCGACCTGCT GGCGTTCCAGCGCCCGGTAAGCAGCCATGCGGCGATGGCCCTGGCCAGCTACAACTCCACCGCCAGCCTCAACATCGACGCCGGCGCCGAGGATGTCCTC GGCCTCGACCTCTACGCCTGAGCGGTTCCCTGCGCTCCCGTGGTTTCCCTTCCTTATTTCCTCGGTTGTCCATCCTGGAACGAGGCGGCCTGGCGCGGCA
|
|
Amino Acid Sequence |
>hypothetical protein
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILA QRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWA RGEGVEAEQALPVYLRDNVATPKKAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|