Pseudomonas aeruginosa BWH054, V555_05107
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH054 adTyv-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAGTACGCCCTGCACCAGGCGCTCGGCGACTTCCTCGAAGGCCGCACCACATTGATCGTGGCTCATCGGCTGTCGGCGGTGAAGCAGGCCGACCGGGT CCTGGTCTTCGATGGCGGGCATATCGCCGAAGACGGCGACCACCAGCAACTGATCGCCGAAGGCGGCCTCTACGCCCGGCTCTACGGACATCTGCAACAG ATGTGAGGCACCAGGCTGTCGCCTGGCGGTTTTTCTCGTATATTCCATATAAGACATCCGGTTTTTATTGGCTGCGGCAATAAAAAACGCTGTCTGTTCC GCCAGGTGCAGGGCAGGTTCGGCAAACAGCCACTAGACTCCTACTGTTTGCCGGGTGTCCGCCTCCTCCAGCGTCGTGGCTGCCGGCAGGCAAGGCCTCG GGAGTTCTGCGACGGGATCTTGAGCGGCCGACAGGTGATGCAGTCAGGGGTGACGGAGACGGCACCCGATCGCTTAGCGCCAGTTTGAATGGTAGATGGA
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| DNA Sequence for Gene |
>V555_05107
ATGAGGCAGAACCGGACTCTCGACAAGCCCCGCCTGCTCGGCCTGGTATGGCCCTTCATCGTCGTGGTGCTGTTGCAGGCCATGCTGGCGGGCGGCAGTC TCTACGTCCTCTCCGCGGTGCGCAGCTATGTCGGCGGCGAAAGCCTCTGGTCGAAGGGCCAGAAGGATGCCATCTACTATCTCACCCTCTATGCCGACTC ACGCGCCGACGAAGACTTCCGCCGCTACGAGGAGGCCATCGCGATCCCCCTCGGCGACCGCGAGATGCGCCTTGCCCTGGACCAGCCCGACCCGGACATC GAGGCGGCCCGCCAGGGCATCCTCAAGGGCGGCAACCATGCCGACGACGTTACCGCGATCATCTGGCTGTACCGCAACTTCCACGACTTCAGTTACTTCG AGCGCGCCATCGAGCTGTGGCTGGTGGGCGACAAGTACGTCATGGAACTGATCGACGTCGCCGGCAAGATGCGCGCGGGCATCGGCGCCGGGCAGGCCAG CGCCGAGCAGGTGCAACAGTGGAAGACCGAGATCCACGCGATCAACGAGAAGGTCACGCCGGCGGCCAAGGCTTTCAGCGACGCCCTCGGCGAGGGCTCG CGGGCCTTGCTCAGGCTGTTGCTGGTGGCCAACCTGACCACCGCCAGCGTGCTCATCCTCCTGGCGTTCCTGCGGACCCGGCAGCAACTGATGCAGCGCC AGGAAGTGGAGAACGCCCTCGATGCCGAGCGCGAACGGGCCCAGATCACCCTGGCCTCGATCGGCGACGGAGTGATCACCGCCGATACCCAGGGGGGCAT TTCTTACCTCAACCCGGCCGCCGAGCAGATGACCAACTGGACGCTGGACAAGGCCCGCGGCCTGCCCCTGGCGTCGCTGTTCCGGATCGTCGACGAAAGC TCGCGGGAGGAGGGCATGCTGCTGATCGAGCAGATCCTCAGCGGCGAGATCGACGGCGGCCGCGAGCATTCCAAGCTGGTCCTGCGCCACGACGGCAGCA GCGTGCCGGTGACCCTGGTGGGCGCGCCGATCCACCGCGGCGGCGAGATCACCGGGGTGGTCCTGGTGCTTCACGACATGACCCGCGAGCGCCAGTACAT GGCGCGCCTGTCCTGGCAGGCGACCCACGATGCGTTGACCGGGCTGACCAACCGCCGCGAGTTCGAGTATCGCCTGCAGATAGCGCTGGAACGCCTGGAG CGCAACAGCGGGCGGCACGCCCTGATGTTCCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCACGCCGCCGGCGACGAACTACTGCGCC AGGTCTGCACCCTGCTGCAACAAGGCTTGCGCGAGGGCGACACGCTGGCGCGGCTGGGCGGCGACGAGTTCGGCATCCTGCTGGAGAACTGCCCGGCGGA AAAAGCCGTGGAGATCGCCGACCATCTGCGCAAGACGGTCCAGGACCTGCACTTCACCTGGAGCGGGCAGCCGTTCAACTGCACCGTCAGCGTCGGCCTG GTGCACCTGCTGCCGGGTATCTCGACCCTCGAGGAGGCACTGCGCTCCGCCGACATGGCCTGCTACATGGCCAAGGAAAAGGGGCGCAATCGGGTCCAGG TGTTCCATCAGGACGACGTCGAACTGTCGATGCGCTTCGGCGAGATGACCTGGGTCCAGCGCATCCACCTGGCGCTGGAGGAAGACCGCTTCAGCCTCTA TGCCCAGCCCATCGTGCCGCTGGGCGAAGGCGCGGAGGAGGGCTTGCACGTCGAACTGCTGCTGCGCCTGCGCGACGAGGGCGGGCGCCTGGTGCCGCCG CTGAGCTTCATACCCGCCGCCGAGCGCTATGGCCTGATGACGCTGATCGACCGCTGGGTGGTGGAGAATGCCTTTCGCACCCTCGTCGAGCGGGCCCAGG ACCCTCGCGCCGAGCCGATCGGCACCTGCGCCATCAACCTCTCCGGCGCGACCATCGGCGACGAGTCGTTCCTGCAGTTCCTCACCGAGCTGTTCGCCCG TTACCGCATTCCGCCGCAGACGATCTGCTTCGAGGTCACCGAAACCGTGGCGGTTGCCAACCTGGCCAGCGCCATCCGCTTCATCAACGAGCTCAAGGAC ACCGGTTGTCGTTTCTCCCTGGACGATTTCTGCGCCGGCATGTCGTCCTTCATCTACCTCAAGCACCTGCCGGTGGATTACCTGAAGATCGATGGCAGCT TCGTCAAGGACATGCTCGAGGATCCCATCGATCGCGCCATGGTCCAGGTGATCAACCATATCGGCCATGTGATGGGCAAACGTACCATCGCCGAGTTCGT CGAGACCGTCGAAGTGATGGAAGCGCTGCGCGAGATCGGCATCGACTATGCCCAGGGCCTGGCCATCGGCGCGCCCCTGCCGTTCAGTCGCCAGCCTCCG GGCGCAGGGCTGGATGCCCAGGGCCTGTGGCCGAGCCTCGGACAGAACCTCCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGACCGCGGAGCGAAGAAAGAGTAGTTTCGCTGCTATGAGGCCGTTGCCGAGAAGAAGAGAAGGGAGACGGGTGTGAGCGAGTTCTTTGACCGTACGGG CCCCTTGCAGGAGGCTGGAAGCTATCCGCAGTGGGCGCAGCAACTGATCGTCGACTGCCAGGCGAGCAAGGACCGGGTTTCCGGCCACGAGCTGTACCGG CGTATGCGCGACGCCGAGCTGAGCCCGGCGCTGATGCGCCTGTACCTGATCGGCGGCTGGCCGGTGGTCGAGCAGTTCCCCTTGTACATGTCGCAGAACC TGCTGAAGACCCGTTTCGCCCGTCATCCCGGCGAAGACATGGCGCGCCGCTGGCTGATGCGCAACATTCGGGTCGAACTCAACCACGCCGACTACTGGCT GCACTGGGCCGAGGCCCACGGCGTGAGCCTGGCCGAGATCCAGGCGCAAGACGTGCCGGCCGAACTGCACGCGCTCAGCCACTGGTGCTGGCACACCTGC
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| Amino Acid Sequence |
>membrane protein
MRQNRTLDKPRLLGLVWPFIVVVLLQAMLAGGSLYVLSAVRSYVGGESLWSKGQKDAIYYLTLYADSRADEDFRRYEEAIAIPLGDREMRLALDQPDPDI EAARQGILKGGNHADDVTAIIWLYRNFHDFSYFERAIELWLVGDKYVMELIDVAGKMRAGIGAGQASAEQVQQWKTEIHAINEKVTPAAKAFSDALGEGS RALLRLLLVANLTTASVLILLAFLRTRQQLMQRQEVENALDAERERAQITLASIGDGVITADTQGGISYLNPAAEQMTNWTLDKARGLPLASLFRIVDES SREEGMLLIEQILSGEIDGGREHSKLVLRHDGSSVPVTLVGAPIHRGGEITGVVLVLHDMTRERQYMARLSWQATHDALTGLTNRREFEYRLQIALERLE RNSGRHALMFLDLDQFKLVNDTCGHAAGDELLRQVCTLLQQGLREGDTLARLGGDEFGILLENCPAEKAVEIADHLRKTVQDLHFTWSGQPFNCTVSVGL VHLLPGISTLEEALRSADMACYMAKEKGRNRVQVFHQDDVELSMRFGEMTWVQRIHLALEEDRFSLYAQPIVPLGEGAEEGLHVELLLRLRDEGGRLVPP LSFIPAAERYGLMTLIDRWVVENAFRTLVERAQDPRAEPIGTCAINLSGATIGDESFLQFLTELFARYRIPPQTICFEVTETVAVANLASAIRFINELKD TGCRFSLDDFCAGMSSFIYLKHLPVDYLKIDGSFVKDMLEDPIDRAMVQVINHIGHVMGKRTIAEFVETVEVMEALREIGIDYAQGLAIGAPLPFSRQPP GAGLDAQGLWPSLGQNLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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