Strain | Pseudomonas aeruginosa BWH054 adTyv-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCTGGACCTGATCCGCGAGCTGCGTTCGCAGGGCAAGTCCTTCCCGATCCTGATCCTCACCGCCCGCGGCAACTGGCAGGACAAGGTCGAAGGCCTGG CCGCCGGGGCCGACGACTACGTGGTCAAGCCGTTCCAGTTCGAGGAACTGGAAGCGCGCCTGAACGCGCTGCTGCGACGCTCCTCGGGGTTCGTCCAGTC GACCATCGAGGCCGGCCCCCTGGTCCTCGACCTGAACCGCAAGCAGGCGCTGGTCGAGGAGCAACCGGTGGCGCTGACCGCCTACGAATACCGCATCCTC GAATACCTCATGCGGCATCACCAGCAGGTGGTGGCCAAGGAACGCCTGATGGAACAGCTCTATCCCGACGACGAGGAGCGCGACGCCAACGTCATCGAGG TGCTGGTCGGCCGCCTGCGGCGCAAGCTGGAGGCCTGCGGCGGCTTCAAGCCGATCGATACGGTGCGCGGCCAGGGCTACCTGTTCACCGAGCGCTGCCG
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DNA Sequence for Gene |
>V555_04075
GTGATCCGTTCCCTGCGCATCCGCCTGATGCTCGGCGCCGCCGCCCTAGCGGTGCTGTTCATGCTGGCGCTGCTGCCGGCCCTGCAGCGGGCCTTCGGCA TCGCCCTGGAGAACACCATCGAGCAGCGCCTGGCCGCCGACGTGGCGACCCTGGTCTCGGCGGCGCGGGTAGAGAAGGGCCGCCTGGTGATGCCCGAGCA CCTGCCGGTGGAGGAGTTCAACCTGCCGGAGGCCAAGGTCCTCGGCTATATCTACGACCAGAATGGCGATCTGCTCTGGCGCTCCACCTCGGCGGCCGAC GAGTCGATCAACTACACGCCGCGCTACGACGGCCGCGGCAACGAATTCCACACCACCCGCGACGCGAAGGGCGAGGAGTTCTTCGTGTTCGACGTCGAGA TCGACCTGCTGCGCGGCAAGCAGGCGGCCTACAGCATCGTCACCATGCAATCGGTCAGCGAGTTCGAGAGCCTGCTCAAGGGGTTCCGCGAGCAACTCTA CCTGTGGCTCGGCGGCGCCCTGCTGGTCTTGCTCGGGCTGCTCTGGCTGGGCCTGACCTGGGGCTTCCGGGCGATGCGCGGGTTGAGTTCCGAGCTGGAC CAGATCGAGTCCGGCGAGCGCGAGAGCCTGAGCGAGGAGCATCCACGCGAGCTGCTGCGCCTGACCCACTCGCTGAACCGCCTGTTGCGCAGCGAGCACA AGCAGCGCGAGCGCTACCGCCACTCCCTCGGCGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTCTTGCAGGGGGTCGGCGACCAACTCGCCGAGGA GCCCGGCAACCGCGAGCAGGTGCGGGTGCTACAGGGCCAGATCGAGCGCATGAGCCAGCAGATAGGCTATCAGTTGCAGCGCGCCAGCCTGCGCAAGAGC GGCCTGGTACGCCATCGCGAGCAACTGGCGCCGCTGGTGGAGACCCTGTGCGACGCGCTGGACAAGGTCTATCGCGACAAGCGGGTAAGCCTGCAGCGGG ACTTCTCGCCGTCCTTCAGCGTGCCGGTGGAGCGCGGCGCGCTGCTGGAATTGCTCGGCAACCTGCTGGAGAACGCCTATCGCCTGTGTCTGGGGCGGGT CCGCGTGGGCGCCCGGCTGGGGCCGGGCTACTCGGAACTGTGGGTCGAGGACGACGGTCCCGGGGTGCCCGTCGAGCAGCGCGCACGGATCATCCGCCGC GGCGAGCGTGCCGATACCCAGCACCCGGGGCAGGGCATCGGCCTGGCCGTGGCGCTGGACATCATCGAGAGCTACGACGGCGAGCTGAGCCTGGACGATT CCGAGCTGGGCGGCGCCTGTTTCCGCATACGTTTCGCTACAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACTTGGCGGCCGTTACCTACGTCTGAGGTGTTTCCGCGCTACGCTGAAGTCTGTTCGGCTGGCGCAGTTCCTTTGACGCAGGTACCGGGGATTCGAGCG GATGTTCAGTGGCAAAACCGACGACAGGGGGTTGTGGGCGGGCATCCAGGCCGGTGTGCTGTTCTTCCTCGCCGCCCTGGCCTGCATCTACCTGTCGCGC CAGCCTGCCACCGTCGCGGCGATCTGGCTGCCCAACGCGATCCTCACCGCCGCCCTGCTGCGCGCGCCGCTGCGCCAGTGGCCAGCGATCCTGCTCTGCT CCGCCGTGGCCAACCTGGCGGCCAACCGCCTGTATGGCGACAGCCTGTGGATGAGCGCGGCGTTCCTGCCGGCCAACCTGAGCGAAGCGATCTTCGCCGC GATGCTGTTACGCATCAACCGGGTGCGCGAGGACTTCGAATTCAACCTGCATTCGGCGGTTCGCGTGCTCTGGGCCGGCGCGCTGATCCCGCCCTTGCTC
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Amino Acid Sequence |
>two-component system sensor PhoQ
MIRSLRIRLMLGAAALAVLFMLALLPALQRAFGIALENTIEQRLAADVATLVSAARVEKGRLVMPEHLPVEEFNLPEAKVLGYIYDQNGDLLWRSTSAAD ESINYTPRYDGRGNEFHTTRDAKGEEFFVFDVEIDLLRGKQAAYSIVTMQSVSEFESLLKGFREQLYLWLGGALLVLLGLLWLGLTWGFRAMRGLSSELD QIESGERESLSEEHPRELLRLTHSLNRLLRSEHKQRERYRHSLGDLAHSLKTPLAVLQGVGDQLAEEPGNREQVRVLQGQIERMSQQIGYQLQRASLRKS GLVRHREQLAPLVETLCDALDKVYRDKRVSLQRDFSPSFSVPVERGALLELLGNLLENAYRLCLGRVRVGARLGPGYSELWVEDDGPGVPVEQRARIIRR GERADTQHPGQGIGLAVALDIIESYDGELSLDDSELGGACFRIRFATV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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