Pseudomonas aeruginosa BWH054, V555_03567
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH054 adTyv-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGCGAGGGCGACGCCCTCGAACTGGCCCGGCATTTCGCTGAGCGCGCCTGCGTGTTCCTGCGCCGCGCGCCGCTGGGCTGGTCCGCGGAAGCGCTG GAACTGCTCGACGGCTATGGCTTTCCCGGCAACGTTCGGGAACTGAAGGGACTGGTGGAATGCGCGGTACTGCTCTGCGAAGGCGAGGTGCTGCTGGCCG AACACTTTTCCCTGCGCGCGCCCCCGGAAGCGGAGGCGCCGCTCAAGCTGCGCGAGCACCTGGAGCAGATCGAGCGCGACCTGCTGCTCGCCTGCCTGCG CAGGAACGCTGGCAACCAGACCCTCGCCGCGCGCGAACTGGGCCTGCCGCGCCGAACCCTGATCTATCGCATGGGACGCCTGAACGTTCATTTCGGCGAT CCCCGGACCTGAAGCCCATGATCGAGATTTCCTTCCATCCAGCCCTGCCGGGCGCGCGCCTGGAGCGCGGCGTCCGCGGCCCTTCCATGGAGACTCCCTG
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| DNA Sequence for Gene |
>V555_03567
ATGCCTGTTCGTCACTGGCCCGCCGTGCTTCTGGCCCTGGCCGTCCTCTGCGGCCTCGCCGGTTGCAGCGGCAACTACAAATTCAACGACGGCGACTATC GCCCGCTTGGCGATCCGCAGGCGATCAATCGCGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCAAGGAGCGATCTCATGGAACTGGTATTGGAAATGCTCAGCGCCAAGCAATTCGTACCGACGGAGCTGTGCAGCAAGACCTTCGGCAGGAACGGCGG CCTCATCGGCCGCGGCGGTGAGTGCGACTGGGCGATTCCCGATCGCAAGCGGCACCTGTCCAAGCAGCATGCGCGGGTCAGCTATCGCAACGGCGCGTTC TACCTGACCGACACCAGCAGCAACGGCATCCGCGCCGGCAACGGCAGCCGCCTGCCGCATGGCGAGCCGCAGCGCATCGAGCAGGACAGCGTCTTCCTGC TCGGCGACTTCGAGATCCGCGCGCGTCTGTTGCGCGAGCCCGACGAGTTCGCCATGGACGTCGGGCGGCCGCAGCCGGCGGGCAGCATCATTCCGGACGA TGCCTTCCTGGCCCTCGATCCGTTGCAGGCGCTCGACCAGGACGGTGCAGATGCCTACGAACTCGACGACCTGAGCGCGATCGCCCAGCCCAGCCAGGAG
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| Amino Acid Sequence |
>type VI secretion protein
MPVRHWPAVLLALAVLCGLAGCSGNYKFNDGDYRPLGDPQAINRGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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