Strain | Pseudomonas aeruginosa BWH054 adTyv-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCGTTGCGCCTGGAGCGGCGAATCGCGCCTGCTGCTGTGCATCACCCTGGAAGCCCGGCAGGTCGGCATCCCGACACTGCACCAGGCCTTGCAGGCGCT GCGCTCGGCGCGCAGCGAAGTGCTCGCCGCATGAGCCGGGTCGGTGCCTGGCACATCGGCATCGAACGGCTCGACCTGGCGCATGCCGAGCCGTTCGCGC CGCCCCTGCCGGAGCGCCATCTGCTGGCGCCCGACGGCCGGCCGGTGGAGACCCACGTCGCCAGCCTGTATCCCGCGCAGCAGGCGCAACAGCGCCTGTT CGACTACGCCCGGCCCCAGCTGGAGTTCCACGGCCTGCTGCGCCCCGGCGACTTCCGCCGGGCGCTGCGCGATCTCCGCCTGGCCCTCACGCTGCCCGGC CAGCCCGCCCTGCAGGCCGCGGCCTGCCTGCTCGGCGAGCGCGACGAAGACGAGCGACTGCTGCAAATGGTCCTGAACCTGTTGCACAAGGTATGAATCG
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DNA Sequence for Gene |
>V555_03528
ATGACGTTGAAACCGACGCAACAGCGCCTGTTGCTGATGCTGGGCTGGTTGCACCTGCAATGCGGCCAACCGCGACGCGCCCAGGTGTTGCTGGAGGCCT TGCTGAGCGTTGCGCCGGAGCGCCGCGACGGGCGCCGCGCCTTGCTCCTGGCGTTGCTCCAGCAAGGCCTCGGCGAGCCCGCCGTGCGCCTGTGCCGGCA GTTGCAGGAGGAGGGCGAGGAGGAGCCCGGTCTGTGGCGTTGCCTGAGCCGTGCCGAACAGCTCGCCGGACGTCTCGACGCGGCGCGTGCCGCGCACGCC CGGGCGCTGGAGCTGGAGGCGCGGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGACCTGAGCGGGCTTCTCGGCCGGGTCGGCGAGCGCAAGGACATCCTGCTGGTGGTGTTGCTGCTGGCGGTGGTGTTCATGATGGTGCTGCCGTTGCC ACCGCTGCTGCTGGACATCCTCATCGCCGTCAACATCACCATCTCCGTGGTCCTGTTGATGATGTCGGTGTACATCGGCTCGCCGTTGCAGTTCTCGGTG TTCCCGGCGGTGCTGCTGATCACCACGCTGTTCCGCCTGGCGCTGTCGGTGAGCACCACGCGGATGATCCTGCTGCAGGCCGACGCGGGGCAGATCGTCA ACACCTTCGGCAGCTTCGTGGTCGGCGGCAACCTGGTGGTGGGCATCATCATCTTCCTGATCATCACCATCGTGCAGTTCCTGGTGATCACCAAGGGTGC CGAGCGGGTCGCCGAGGTCAGCGCGCGCTTTTCCCTGGATGCCATGCCGGGCAAGCAGATGAGCATCGACGGCGACATGCGTGCCGGCGTGATCGATGTC
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Amino Acid Sequence |
>hypothetical protein
MTLKPTQQRLLLMLGWLHLQCGQPRRAQVLLEALLSVAPERRDGRRALLLALLQQGLGEPAVRLCRQLQEEGEEEPGLWRCLSRAEQLAGRLDAARAAHA RALELEARE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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