Pseudomonas aeruginosa BWH054, V555_02363

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWH054 adTyv-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCTGGTCGACGAGACTCTGGTCTTCAGCGCCTGGCCGGGACAGGGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGG GCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTTTACCTGCAATGTCTGATCCTCGGCTT CCGCGGTCGCCTGCGCGGGCCGCGCGGCGAGGCGCTGCACGAGAAGTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGAC CTCGGCCGTCGCCTTGAGCAGCCTGCCGCCGCGCCGCCACGGCGCCTGCCGGTGCGCGCGGCGTTGCCGGACGGTTTCCGCCTGGGCCTGGCGGTGCTCG GCCTGGTGCTGCTGATGAGCGGCATCGGGCACCTGTTCTGGCGCGACATCCAGCATGAAATGGCGGCGGTGACCCACCTGGCCGATGCGGAGCAGGCGCC
DNA Sequence for Gene
>V555_02363
ATGAGCGGCGCGACGCTGTTCATGCTGGTTCTCCTCCTGCTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGGACCCGGGGCGGTACGG AGATCCGCAGCTTCTACGCGGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCCTGGCTGCTGATGCTCGGCAACGAGAC CGAGGGCGAGCAGTTGTGCGCCACCTGGCGCCTGCTGCCGGTGGCGCGTCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTG GTGCCGGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGCGGCAGGCGCG CGCTGGACGGGGTGGTCTGGAACATTCCGCTGGCGCGGTTGCAGGATGGCGAGCAGGCGGCCGCCCTCGGCCTCGCCGCCCGTCGTCGCTACGTGGAGCT GACCCAGCGCCTTGGCCTGAGCCTGCCGGTGTACGTGGTGATCACTGGCCTGGAAGACCTGCCGGGTTTCCAGGAACTTCTCGCGGCGCTGCCCGAGGAG GCGCGCGAGCGCGCCCTCGGCTGGTCCTCGCCGTTCGCCGCCGAGGCGGCCTGGCAGTCGCGCTGGTGCGAGCAGGCGCTGGAGGAAATCACCGTCACCC TGACCGAGTCGATCGTCGAACTCGGTACCTTGCGCGGCCAGGTGAACAACGACCTGTATTGCCTGCCGCCACGCCTGGAAAGCCTCCGCGGTTCGTTGCA GGCGCTGCTCGAACCGGTCTTCCAGGGCAACGCCAGGGGCGAGGCGCCGCGCTTTCGCGGTCTCTACCTGAGCGGCAGCGAGGCGGCGGGGGCGGCAAGC GACGAAGCCCTGCCGGCGGTCGACGCGCCGCGTCGGCGCAGCAGCTTCGCCAGCCAACTGTGGGCACGGCGGATCCTTGCCGAGGAAGGCCTGGCCCAGG CGGTGCCGCGCATCCTCCAGCTGCGCCAGCGCTGGCAGCGCGGTATCGGCCTCGCTGCGCTGTGCCTGTGCCTGCTCTGGGGCGGCCTGATGACCTGGGT CTGGCGCGACGCGCTGCGCGACGCCGGCGAACTGTCGCAACTGCTGCATGGCGCCAGCGAGCGCTACCAGCCGCTCGACGACGACACCCGGCGCGCCGCC CAGGTCCGGCAGAACGTCCAGGCCTGGTGGCAACTGGTGGCACAGGCGCCGCGCTGGCGCTTCACCTCGCTGGCATTCCCCAGTTCCTGGTTTTCCTCCC TGGACGCACGCATCGACAGCGCGTATCGCCGCGTTTCCGAGCGCCTGCTGGTACGCCCGCTGCGCAGCCTGCTGGAAGGCGAGGCGAGCGACCTGCGGGC GATCCGCAGCGACGGCCAACCCGGCCTGAAGGAGGGCGACGACCCCAGCCAGTGGAAGGACTACCTGGCGGCGAAGGACCTGGTCGCCCGCGCCACTACC CTGGAGCGCCACAATCGCCTGTTCGCCCAGGCCATCGACAACCGCAAGACGCCGCTCGACGATCTCCTGCAACTGAGCAACGACGCCCTGGGCAGCAGCT ACAACGGCGGCAGCCTGGCGCGCCTGGCCTACTACAACCGCACGCTGTTCGCCGAGCGTCCGGCCGATCTCGCCGCCCTCGACCTGGGCCGGGTCGGCGC CACGGCGGCGGATAACTTCCATGACCTGATGGCACGCTGGCTGAACGCCTACTTTCTCACCGACAGCCTGGAACGCACCGGCAATGCCCTGACCCAGGAA CTCGCGCAGCTCGGCCAGGAACGAGATGCCACGGCGGCCCAGTTGCTGGGGGTCGGCGAATTGATCAACCACCTGCAGCAGCAGGTCAACCGCATCAACC TGATCTGGGGCAATGGCGTCGGCCAGGATCTCGTCCCTGGCTACCAGAACCTGCTCAAGAGCGCCCAGCAAAGCAGCCTGCTGGGAGACCGCGTGGAGGA ACTGCAGAACCTCACGGTGCAGTTGCAGCAGCAGTTCCGCAGCGAATGGATCGCGCCTCCGGAGGCTGCCGGCGACGGCCTGCTGGTGAAGCAGGGGGCG ACGCTCAAGCTGGCCGATGACCTGCTCGGCCTGAAACGCGCCATCGATGACCTGAAGACCAAGGACTTCGTCTCCGTGGCCCTGGCCGGCAAGACGCTGG CGGAGCACTCCCTGCTGAGCATCGACGACATCGGCGTGACCCAGGCGTTGAGCTTCTTCAACGACTTCAGCGGCTACTACGAGAGCACCCTGCCGTCGCT CAACCCGCGCTATCGCTACTCGGTCCTGCACGCCGCCGCCAGCGCGACGACCGAGGCCATGTGGCAGAGCCTCGGGCCGCGCAGTCGCAGCCTGACCAGC CGCAATGCCTCGCGCTTCGACGTGCAGGTCAAGCAGGTCCAGGCATTGCAGGCGGCGCTGCTGGAGTTGCAGGACATGCAGGCCGGCGCGCGCCTGCTGG CCAGCCTCAACGCGCTGGCCGTGGCCGATATCGGCCAGGCCCTGCGCGACATCGACGAGCAGGCGGTGCTGCGCGAGCCGGTCGATTTCAGTCGCTGGTC GGGCGCGCCGAATTTCGGCCTGCAGGCGTTCCGCGCCCAGGACAGCGCCGAGCTGAAGCAGAGCCTGACCAGCCAGTTCAATGCCATGGCCGCGGTCGCC GAGCGCCACGCCCCGGCGCTGGAGTGGCTGCAGGCGCAGCAGTCCAGCCTGGCCACCGCCGACTACAACGCGTTCGTGCGCTTCAGCGCGCTCAACGCCG AACTGCAGAAATTCAAGGCCGACAACCCGGCGAGCACCGCGGCGCAGCTGGCGAAGCTGGTGGGTAACGATTTCAACCAGATGGACATCGGCAGTTGCGC CGACATTCTCAACGGCGTGCTCCTGCCGTCCAGTCGCAGCGACCTGGCGACGCGCCTGGTGGACCTGCGCCAGGGCGCGCTCGGGCGCTGCCAGTCGCTG CAACAGCAGCAGGCGGCGCAGGCCTGGAAGGACCTCGCCGACTACTTCAACCAGTACCTCGCCGGACGCTTCCCGTTCGCCTACAGCCTGGAAGCGGCCG ATGCCGAGCCGGGGCGGGTGCGGCACCTGCTGAAACTGATGGAGACGCGCTTGCCGCAGGTGCGCGAAGGGCTGGCCCAGGTTCGCTCGCCGGACCTGCC GGCCGCCGAGGACTTCGTCCGCTGCCTGGAGCAGGCGCAGCGCTGGCTCGGCCCGCTGTTCGAGCGCGACAAGTCGGGCCTGCTCGGCGTCGCCCTGGAC ATCGACTGGCGCAGCGACCGCAGCCTGGAACGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGTACTCGGGCGACCAGGAAAGCCGGTTCCCCGGCGCGC AGGACAAGGGCCTGACCTGGAACGTCGGCGATCCGCTGAAGATCATGCTGCGCTGGGCGAAGAACGGCTCGCAGCGTCCGGCAGACGACCCGCGCCAGGC CAGCCTGGCGGTGGCCGACCTCGAGGCCGGCTGGAGCTACCAGGGCTCCTGGGCGCTGCTGCGCATGATGCGTGCGCACTTCTCCCGGCAGCGCCCGCCG AACGTCGACTACACGGAGTTTCCGCTGGTCCTGCAACTGCCGGTGTATGCGCCCTACAGCCCGGAAAACGAGGCGCGGATGTTCCTCCGCCTGTCGTTGA TGAGCCTGGGCGGCAAGACCCCGCTGTCCATCCAGCCGCTGCCGGTGCGCGCGCCGCAATCGCCGTTCGCGACGCTGTTGCCGGCCACCGTCGCCAGCAC CGGAGGTATCCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGCCTCTTTCCGGCAACGCCCTGTCCCTGGAAGTGCTGCTCGAACCCATCGCCCCAGAACAGCCGTGCGGCCCCAGCCTGCGCTACGACCTGGACTA CGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAGGCGGAAGCCAAGCGCGCCGACTGGGCCGCGGTGGAGCAG TTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTGCAGC GCGCGCTGGTGCTGCTGGCGGAACTCTGCGAGCGCTACCCCGAGGAGGTGCATCCGCAAGCCCAGGACGGCGACCAGTCGTGGCGGGTGCCGCCCATCGA CTGGCTGTTGCGCCGCTATGCCGAGCTGCTGCACACGCGCCTGCCGCTGATGGGGCAGGGCGCGTTCGCCGAGATCACCCTCTATGCCTGGCAGAGGTTG
Amino Acid Sequence
>type VI secretion system protein ImpL
MSGATLFMLVLLLLLLALLLGALGWWWRTRGGTEIRSFYAAVRQMEREQGWQGRYEAPWLLMLGNETEGEQLCATWRLLPVARPAWFGRWWSDGEGAILL VPESVFLPDEGLRRQSGAWLRLLRLFLRLRGRRALDGVVWNIPLARLQDGEQAAALGLAARRRYVELTQRLGLSLPVYVVITGLEDLPGFQELLAALPEE ARERALGWSSPFAAEAAWQSRWCEQALEEITVTLTESIVELGTLRGQVNNDLYCLPPRLESLRGSLQALLEPVFQGNARGEAPRFRGLYLSGSEAAGAAS DEALPAVDAPRRRSSFASQLWARRILAEEGLAQAVPRILQLRQRWQRGIGLAALCLCLLWGGLMTWVWRDALRDAGELSQLLHGASERYQPLDDDTRRAA QVRQNVQAWWQLVAQAPRWRFTSLAFPSSWFSSLDARIDSAYRRVSERLLVRPLRSLLEGEASDLRAIRSDGQPGLKEGDDPSQWKDYLAAKDLVARATT LERHNRLFAQAIDNRKTPLDDLLQLSNDALGSSYNGGSLARLAYYNRTLFAERPADLAALDLGRVGATAADNFHDLMARWLNAYFLTDSLERTGNALTQE LAQLGQERDATAAQLLGVGELINHLQQQVNRINLIWGNGVGQDLVPGYQNLLKSAQQSSLLGDRVEELQNLTVQLQQQFRSEWIAPPEAAGDGLLVKQGA TLKLADDLLGLKRAIDDLKTKDFVSVALAGKTLAEHSLLSIDDIGVTQALSFFNDFSGYYESTLPSLNPRYRYSVLHAAASATTEAMWQSLGPRSRSLTS RNASRFDVQVKQVQALQAALLELQDMQAGARLLASLNALAVADIGQALRDIDEQAVLREPVDFSRWSGAPNFGLQAFRAQDSAELKQSLTSQFNAMAAVA ERHAPALEWLQAQQSSLATADYNAFVRFSALNAELQKFKADNPASTAAQLAKLVGNDFNQMDIGSCADILNGVLLPSSRSDLATRLVDLRQGALGRCQSL QQQQAAQAWKDLADYFNQYLAGRFPFAYSLEAADAEPGRVRHLLKLMETRLPQVREGLAQVRSPDLPAAEDFVRCLEQAQRWLGPLFERDKSGLLGVALD IDWRSDRSLERGADQVIAWSLYSGDQESRFPGAQDKGLTWNVGDPLKIMLRWAKNGSQRPADDPRQASLAVADLEAGWSYQGSWALLRMMRAHFSRQRPP NVDYTEFPLVLQLPVYAPYSPENEARMFLRLSLMSLGGKTPLSIQPLPVRAPQSPFATLLPATVASTGGIP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site