Pseudomonas aeruginosa BWH053, V554_05087

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08447 PAS fold IPR013655 PAS fold-3 316 385 4.4E-17
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 697 950 2.0E-95
Gene3D G3DSA:3.30.450.20 PAS domain - - 269 388 1.1E-28
SMART SM00091 pas_2 IPR000014 PAS domain 400 466 2.6E-8
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 530 688 1.1E-42
Pfam PF13426 PAS domain IPR000014 PAS domain 411 512 6.6E-16
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 323 398 1.8E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 391 511 4.54E-24
SMART SM00086 pac_2 IPR001610 PAC motif 349 392 1.0E-6
SMART SM00052 duf2_2 IPR001633 EAL domain 696 941 9.3E-119
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 701 948 7.72E-92
SMART SM00091 pas_2 IPR000014 PAS domain 277 342 46.0
SMART SM00267 duf1_3 IPR000160 GGDEF domain 514 686 5.0E-52
Pfam PF00563 EAL domain IPR001633 EAL domain 703 936 3.2E-73
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 397 521 2.2E-19
CDD cd00130 PAS IPR000014 PAS domain 319 389 1.06361E-5
CDD cd01948 EAL IPR001633 EAL domain 702 941 1.54145E-103
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 526 684 3.4E-32
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 377 943 0.0
CDD cd01949 GGDEF IPR000160 GGDEF domain 526 684 4.68595E-54
Coils Coil Coil - - 690 710 -
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 530 695 1.7E-50
SMART SM00086 pac_2 IPR001610 PAC motif 472 514 0.0021
Gene3D G3DSA:3.30.450.20 PAS domain - - 397 529 7.2E-32
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 697 950 3.0E-102
Coils Coil Coil - - 212 264 -
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 526 681 1.9E-41
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 319 394 2.79E-14
CDD cd00130 PAS IPR000014 PAS domain 409 511 1.84134E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.