Pseudomonas aeruginosa BWH053, V554_04524
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH053 adTyt-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGAGTCGGTGATCCGCCGGGCGCTGCTTTGCGCCGAACGGGTCGCCCTGGTGCCGAGCCACCGCCACGCCTTCGGCAAGCGCATGGGCGATTTCGAGC TGCGCTGCCGCTGGCTGGCGCGGCTGGCCCGGCGGATCGATCCGCGGCGGGTGTATTGCGAGCCGATCGAAGCAGGATTGATGCCCGATCGTCCGGCGGT CTACAGCATCGACCTGCTGGAAGCGCTGGCCGCGCGTAGCGGCCTGGCGTCAGCGCGGATCGCCCTGCTGATCGGCGCCGACAACGAGGCGGAGCTGCCG CGCTTCGAACGCGCCGCCGAATTGTGCTGGCGCTTCGGCCGGCTGGTGGCGGAGGAGCGGCTGCCGCTGCACAGCTCGATGATCCGCCAGCGCCTGCGCG AAGGACTGGCGATACCGGAGGCCTGGTGCCTGCCGGAAGTGAAGGACGAACTGCACTGCTATGGCGGCGAACGCCAGGCGGTCTGAAGAGAGGAGTGACG
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| DNA Sequence for Gene |
>V554_04524
ATGAGTTCAGCGGAAGTATTGGCCAGCGTGGATATCGTGGCGTTGCGCCTGAACCCCGGGCACGGACTGGAGCTGTTGCTGATCCGCCGCGCCCAGGCGC CTTTCGCCGGCCAGTGGGCCTTGCCCGGCGTGCTGGTCAACGGCCGCAGCGCCGACCACAGCCTCGACGACGCGGCGGTGCGCGCCCTGCGCGACAAGGC GCGGCTGGAGCCGGCCTACATCGAGCAGGTGGCCACGGTCGGCAACGCGGTACGCGACCCGCGCGGCTGGTCGCTGAGCGTGTTCTACCTGGTGCTGGTC GGCCCGGACACCCGGGTGGAGGACGACGACCTCGACTTCGTGCCGCTGCGCGACGTTCGCAGCGAGCGCTTCGCCCTGCCGTTCGACCACGCCCAACTGG TACAGCAGGCCTGCGAGCGCCTGGCGAGCAAGTCGGTGTACAGCGCCCTGCCGCTGTTCCTGCTGGCGCCGCGCTTCACCGTGGCCGAGGCGCTGAAGGC CTTCGAGTGCGCCATCGGCCAGGAAGTCCAGCATTCCAGCCTGCGCGGGCGCCTGGAGCGGATGAAAGAGGCTGGCTGGGTCGAGGACACCGGCGAACGC CAGCGTCCGCCCATGGGGCGCCCGCAACACGTCCTGCATTTCACCCCGAAGCAGGGCGGCGCCTTCGTTTTCGACCGCAGCCTGCTGGCGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAAACGGGTGCGGCAGGGCCGGTGAGGCCGCTCCCTGCCGCGCTTGCTAGACGGTGAAGCGCTGGATCTGCTGCTCCAGTCCGTTTGCCAGCTTCGCCAG CTCGACACTGGAGGTGGAGGTCTTCACCGCGCCCTCGGCGACTTCACCGATGCTGGCATTGAGCGAGTCGATGTTCTGGCTGACCTCGCTCGCGGTGGCG GTCTGTTCTTCCGTCGCCGTGGATATCTGCGCGTTGCTCTGGGCGATGCCTTCGATCGCCTGGGCGATGAGACCGAGCGCCTTTCCCGCCTCGTGGGCGC GCTGGACGCTGACCTGGGCCTGCTCGCGTGACTGCTGCATCACGCTGACCGCGCTGCTGGCGCCTGCCTGCAGGGCTTCGATCATCTCGCGGATGGTTTC GGTGGCCTTGTGCGTATTGGTGGCCAGGCTGCGCACTTCATCGGCGACCACCGCGAACCCGCGTCCGGCCTCGCCCGCCCGTGCGGCTTCTATCGCGGCA
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| Amino Acid Sequence |
>NUDIX hydrolase
MSSAEVLASVDIVALRLNPGHGLELLLIRRAQAPFAGQWALPGVLVNGRSADHSLDDAAVRALRDKARLEPAYIEQVATVGNAVRDPRGWSLSVFYLVLV GPDTRVEDDDLDFVPLRDVRSERFALPFDHAQLVQQACERLASKSVYSALPLFLLAPRFTVAEALKAFECAIGQEVQHSSLRGRLERMKEAGWVEDTGER QRPPMGRPQHVLHFTPKQGGAFVFDRSLLAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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