Pseudomonas aeruginosa BWH052, V553_03924
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGATCGATGCCGCCGCCTTGCGCGAAGGCTGGGCCGCGTTGAAGGACACCCATCATTTCCACGCCCTGCTGAAGAAGCATGGCGCGCAGCGCACCCAGGC GCTGCGCCTGGCTGGCGGCGAATGGGCCGAGCGCCTGGATAATGGCGACCTGGCGAAACTCTTCGAAGCGGCGGCCGAAAGCGGATTGCCGATCATGGTG TTCGTCGGCAACGCCCACTGCATCCAGATCCATACCGGGCCTGTGTGCAACCTGAAGTGGCTGGACGACTGGTTCAACGTCCTCGATCCGGAATTCAACA TGCACCTGAAGACCACCGGCATCGCCGAGCTTTGGCGGGTGCGCAAGCCGAGCACCGATGGCATCGTAACCAGCTGGGAGGCCTTCGACGCCGACGGCGA ACTGATCGTGCAACTGTTCGGCGCGCGCAAGCCCGGCGAGCCCGAGCGCGACGACTGGCGCGAACTGGCCGAATCCTTCAAGGCGCTCTGAGGAGAGATC
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| DNA Sequence for Gene |
>V553_03924
ATGCGTATCGTTCGACTATTCAACGGGTTGGCGCTGGGCATCCTGCTCGGCACCGGCATGGCCCAGGCCGCCGAGCTGCCGCAACGCTGGGTGAGCGCGG GCGGCTCGCTGAGCGAATGGGTGGTGGCGCTGGGCGGCGAGAGCAAGCTGGTCGGGGTGGACACCACCAGCCAGCATCCGCAGGCGCTGAAACAGTTGCC GAGCGTCGGCTACCAGCGCCAACTGGCTGCCGAGGGCGTGCTGGCGTTACGTCCGGATATCCTCATTGGCACCGAGGAAATGGGGCCTCCGCCGGTACTC AAGCAGCTCGAAGGCGCCGGCGTGCGGGTCGAGACCCTCTCCGCCAAGCCGGATCTGGAGGCACTGGAAAGCAACCTGAAGAAGCTCGGCGACTGGCTCG GCGTGCCCCAGCGCGCCGAGGCCGCCGAACTTGACTATCGTCAGCGGCTGCGGCGCCAGGCGGACTGGATCGCGGCCGCGCAGAAGAGTCAGCCGGCCCC GGGCGTCCTGCTGGTGATCGGCAACGCCGGGGGTCAGTTGCTGGTAGCCGGGCGCAATACCGGCGGCGATTGGGTCCTGAACCGAGCCGGAGCACGCAAC CTGGCTACCCATGAGGGTTACAAGCCGATCTCGGTGGAAGCCCTGGCAGCGCTCGATCCGGTCGCGGTGGTGATCGCCGACCGCAGCCTCGAAGGTGATG CGGCGCGTGCCGCGCTGCTCAAGCAGAACCCCGGCCTCGCCGCGACTCGCGCGGCGCGTGACGGACGTCTGCTGGTGCTTGACCCGACGCTCCTGGTGGG CGGCCTCGGTCCGCGCCTGCCGGATGGCCTGGCGGCTCTCTCCGCAGCCTTTTATCCTTCCGCGAAACCGCTGAGTACGGAAGCCGCCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCGGTTGTTCGTCCCCGCGCACTGTTCGGTGCGCTGGGGATTTCGCTCGTGTTGGTCCTCTGGTTGTCCCTCGCCCTCGGTCCCGTCAGCCTGCCGCT GGGCGATACCCTGCGCGCCGCGCTGCGCCTGGCCGGGCTGCCGCTCGATGGAACGGGCCTGGCCCAGGCGGAAATGATCCTCGGCCAGATCCGCCTGCCG CGGACCCTGCTCGGCCTGGCCGTGGGCGCGGTGCTGGCGCTGTCCGGGGTGGCGATGCAGGGCCTGTTCCGCAACCCGCTGGCCGATCCAGGGCTGGTCG GGGTGTCCAGCGGCGCGGCCCTCGGCGCGGCGCTGGCCATCGTATTCGGCGCCTCGCTGGGTGGCTTGCCGGCGTTCCTCGCGCCCTACCTGCTGTCGCT GTGCGCCTTCGGCGGCGGCCTGGGGGTGACCTGGCTGGTCTATCGACTTGGCCGCCGCGATGGCCAGACCAGCGTGGCCACCATGTTGCTGGCAGGGATC
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| Amino Acid Sequence |
>Heme-transport protein, PhuT
MRIVRLFNGLALGILLGTGMAQAAELPQRWVSAGGSLSEWVVALGGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVL KQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARN LATHEGYKPISVEALAALDPVAVVIADRSLEGDAARAALLKQNPGLAATRAARDGRLLVLDPTLLVGGLGPRLPDGLAALSAAFYPSAKPLSTEAAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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