Pseudomonas aeruginosa BWH052, V553_03772
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGGCGACCATGGTGAACTCGACTGCGCCGATGCCGCCCTTCTCCACCGGCGTGCTGCGCCAGGCGTGATGGGTGAACTGCGAGTCGATGGAGACACCG ACCACCTCGACGCCCAGCTCGCGGAACTTATCCATGCGGTTGTTGTGGGCGATGATTTCCGAGGGGCAGACGAAAGTGAAGTCGAGCGGCCAGAAGAACA GCACGACGTACTTGCCGCGCAGGCTGGAAAGCTGGAACGCATCGACGATGGAACCGTCGCCGAGGACCGCGGCGGCAGTGAAGTCGGGGGCTTGCTTGTT GACCAGTACGCTCATCGTCGAGGCTCCTAGAAGGTTGGGTTCCGCCCGGCGACGCCAGGCTCCCGGAAGAATATGCAGCGCAGGTTACCCAGCCACGACG ATGCATTGAAATGTCGAATTTCAATTCGCACGATAGAGTCAGCCTATGCTCTCAACCTGCGGCTAGACTCATGCTGTCGCCCATTACCCGTCCTCACCGC
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| DNA Sequence for Gene |
>V553_03772
ATGCCCCTACGCACACGCCTGCTCTGGCTGTTCCTGCCGTTGCTGGCCGCCAGTCTCGGCGGTATCTGGCTCTTGTCGGAAAGCATCCTGCTGAGCCGTT TCGACCGAGAGGACCAGCAACGCCTGCAAGAGGGCGCCACCGTCCTGCACAACCGGCTGGACTTCGAGTTGAAGCGCCACCTGGACATCGTTCGCACCTA CGCCTGGTGGGATGCCAGCTACGACTTCATCCAGCGCCCCAACGAGACCTTCGAACAGGAAAACCTCGACCACGAGATGCTCGACGACCTGGGGTTCGAC TTCGTCCTGTTCCTCGACGACCGGGGTCACCTGCAACTGAAGCAATGGTCCCCGCCCGCACCCGACCAGCGCGTGCTCTTCGGCGCCCCCTCGGCGAGCG ACCAGGCCCTGCTCGAGGCGCTGCAGCAACGCGCCATCCGCCTCGGCGCGCTGGACTTTCGCGGACGCACCGACCACAGCCTGAGCGAGCTGCTGCTGGT CGACAACCTGCCGACCCTGCTGGTCAGCGTGCCTATCAGCAACAACCAGGGTAGCGCGCCGGCGAAGGGCGCGATCCTCGCCGGCTACTTCCTCGACCGG GAACGCCTGGCCAACCTCCGCGAACAGATGCAGGCCGACCTGCAACCGATGCCCAACATCGCCACCGACTCCACCTGGAAGCCGCTGCGCAGCCGCAGCG GCAGTACCCACAACCAGGCCCTGCTCAGCCCGCGGCGATTCATCGGCGAACATGTCCAGCAGGTCTCGGTGCAGTACCTGAGTTCCAGCGGCGAGCCGCA GCTGCGTTTCGACATCACCAAGAGACGCCTGCTCTACATCCAGGGCGAGAAGGCCATCAACTTCTTCCTCGGCGCCTCCCTGCTGGTCGCGCTGGGCGCT TTCCTGGTCGGCTACCTGGCCCTGGAGCTGTGGGTCCTGCGCCGGGTCCAACGGCTCAACCGGGAGGTCGCCGAAGTCGGACGCAACGCCCACTCGATAC GCCTGAGCGACTTCGGCAACGACGAGCTGGGACAACTGGCGGGCGAGATGAACCAGATGCTCGAGCGCCTGGAACACAGCGAGGCGCGCGACCGGGCGAT CCTCCAGTCGATGCGCGACGGCTACTTCGAAATGGACGTCGACGGCGTGATCCTCACCGTCAACCCCGCGCTCTGCCAACTGCTCGGTCAGACGCGCGAA ACGCTGATCGGCCACCCCTACTACGAACTGCTCGGCGAAGACGACCTGGCGCGTGCCCGCCAACCCTTCCAGCGCGCCATGCAGAGCGGCGCAGGCAAGA CCTTCGCCATCCCCCTGCAGCGCGCCGACGACAGCCTCGGCTACTTCGAGGCCACGGTTTCGCTGATCCACGACCTGCAGGGCGAACTGCGGGGCTACCG CGGCATCGTCCGCGACGTCAGCGACCAGATCGCCTACCAGCAGCAATTGCTGGAAATGGCCTACCGCGACCCGCTGACCGGCCTGGGCAACCGCAAGGCC TTCGACGAACAGCTCGGCCAGGCGTTGCTTCGCGCCGGCTCCGGCGGAAGCGAACTGGCGCTGCTGTACCTGGACCTGGACCGCTTCAAGGAGGTCAACG ACCGCTTCGGCCACGACATCGGCGATGCCCTCCTCAGGACCGTCGCCGAACGGGTACGCAGCACCCTGCGGCAGCCGGACAAGGCCTACCGCCTGGGCGG CGACGAATTCGCCGTGCTCCTCGAGGACAGCCAGGAAAACAATCCGCAGCGCCTCGCAGAACGCCTGCTGGCGGCGCTGGTCCAACCGATCGCGCTGAAT GGCGAACGCATCGACTTCGTCACCCCGAGCATCGGCATCGCTCTCTACCCGCGGCATGCCGGCGATGCCGAAGGACTGGTCCGTGCCGCCGACAGCGCCA TGTACGAGGCCAAGCGCCAGCGCAACCACTATTGCCTGTACCAGGCGCCAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCGCGGTCAAACAGGCTCTGTCGCGGGCTTTCGCCAGTCTGCTAAGGTTTCAGCCCGCATCCCATCGGAGAACCATTCCCTATGCCAGCCCTGAGCG GCCCGCAATACCTCGGCGAAGGCCTGAAGCTGATCATGCGTCCCGGCCTGCGCCTGTTCGTGCTGATCCCCCTGACCCTCAACCTGCTGGTGTTCGCCCT GCTGATCGGCTTCGCGATGCAGCAGTTCAGCCACTGGGTCGACCTGCTGATGCCCAGCCTGCCCGACTGGCTGAGCTTCCTGCAGTACATCGTCTGGCCG TTGTTCGTCCTGCTGGTGCTGGTGATCGTGTTCTTCACCTTCACCATGGTCGCCAACATCATCTCCGCGCCGTTCAACGGCTTCCTCTCGGAAAAGGTCG AGGTGGTGGTTCGCGGCCGCGACGACTTCCCGCCGTTCAGCTGGGCCGAACTGCTGGCGATGATCCCGCGCACCATGGGTCGCGAGATGCGCAAGCTCGC
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| Amino Acid Sequence |
>PAS/PAC sensor-containing diguanylate cyclase
MPLRTRLLWLFLPLLAASLGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDFIQRPNETFEQENLDHEMLDDLGFD FVLFLDDRGHLQLKQWSPPAPDQRVLFGAPSASDQALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKGAILAGYFLDR ERLANLREQMQADLQPMPNIATDSTWKPLRSRSGSTHNQALLSPRRFIGEHVQQVSVQYLSSSGEPQLRFDITKRRLLYIQGEKAINFFLGASLLVALGA FLVGYLALELWVLRRVQRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRAILQSMRDGYFEMDVDGVILTVNPALCQLLGQTRE TLIGHPYYELLGEDDLARARQPFQRAMQSGAGKTFAIPLQRADDSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQLLEMAYRDPLTGLGNRKA FDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFGHDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLLAALVQPIALN GERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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