Pseudomonas aeruginosa BWH052, V553_03694
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAACAGGCTTGCCGGATTCACCGAATAGACCAGCAGGGAACCGCAGAACAGCCCCAGGCCCAGTTGGCCCATGCGGCGCAACCAACCGTCGTGGCGG AGCAACACCACCAGCAGGACGCCGTACAACAGGCAATCGACCCGCGCCACCGAGTCCTTGACCTGCAACGACTGTTCCCAATCCCCCAGCCACCATCCAG CGGCCACGCCCAGCACGACTCCGGCGCCGACATGAATGCCCGCCTGGATCATCGTCACCCTTCCCCCCTCGGAAATGGTCGGACAGTGCAAGCCGCCACT ATGCCCACGGCAAGCTGAACCATCGCTGAACGAACACCAGCAAATGGCCTTCGGCCACTTCGCCGACGCAACTCCTGAAAAACCCGGCGGTCTTCTCCCT GTGACAGGACGCCGCCCCGCACAGAAAAAATCTGCTGCGACCACTTGGGAACTCGCCCGAGAGGCCATACTCTGTCGCGCAAATTCCCATGAGGTGGCTG
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| DNA Sequence for Gene |
>V553_03694
ATGCGCACCGACGCTCCCGTTCCAGAACATCCCGCTCCACCCAGCTCTCCCGCGTCCCCACAACGCATCCGGCTGATCGATCGGATTACCGCCTACCGCC AGCCCATCGGCCTGGTCTTCACCTTGCTGCTGTTCGGCCTGGCGCTGGTGGCCTGCTACCACCTGCTACGGGAGATCGATCCCGGCGCCCTCCACGATGC CATCGCCGACGTGCCCAGGCCGGCGCTGCTCGGCGCCCTGGGCGCGACCGCCCTCGGCTTCGTCATCCTGCTCGGCTACGAGTGGTCGGCCAGCCGCTTC GCTGGCGTCACGCTGCCCATGCGCAGCCTGGCCACCGGCGGCTTCAGCGCCTTCGCCATCGGCAATGCGGTAGGCCTGTCGCTGCTTTCCGGCGGCTCCG TACGCTACCGACTGTATTCCCGGCATGGCATCGGCGCTGCCGAAATAGCCCGGATGACGCTATTTGCCAGCCTTTCCCTGGGCTGCGCACTGCCGGTGCT GGCGGCACTCGCCGCACTCTGCGACCTCGACGATGCGGCGTCGGCGCTGCACCTGCCCCGCGCCCTGGTCGCCGTCATCGCGATCGCCGTCCTGTCGCTG GCTGTCGGCCTGGTGGCGTTCCTGGCCCGGCACCGTCTGCCGGGAGAACGGCCGTCCCCCGACAGCCTGCTGGTCCGCCTCGGCCGCCGCAGCCTGCGCC TGCCAGGCCTGCGCCTATCGCTGCTGCAACTGCTGATCACCGCCCTCGACGTCGCCGCCGCCGCTACCGTCCTTTATCTGTTGCTGCCGGAAACCCCACC CTTCGCGGCGTTCCTGCTGGTCTACCTGCTCGCCCTGGCCGCCGGCGTGCTCAGCCACGTACCGGGCGGAGTCGGGGTGTTCGAGGCGGTGCTGCTGGCC GCGTTCGCCGGCCAACTGGGCGCCGCGCCGCTGGCCGCGGCCCTGCTCTTGTACCGCTTGATTTATGTGGTACTGCCACTGCTGCTGGCCTGCCTTTTGT TGCTGTTCCTCGAAGCGCGCCGGTTGTGGGTGACGCGCCAGGCGATCCGCGTCGCCTCGGGTTTCGCCGCACCGATCCTGGCGATCCTGGTCTTCCTCTC CGGTGTCGTGCTGCTGTTTTCCGGCGCCACACCGGCGATCGACACCCGCCTGGAACACCTCGGTTTCCTCATTCCACATCGCCTGATCGATGCCTCGCAC CTGGTCGCCAGCCTGATCGGCGTGCTCTGCCTCCTGCTCGCGCAGGGTTTGCGCCGACGGCTGTCGGCCGCCTGGGCCCTGACCCTGGTGCTGTTGCTGG TGGGCGCCCTGCTTTCGCTGCTGAAAGGCTTCGACTGGGAGGAAGCCAGCCTGCTGAGCCTGACCGCCGCGCTGCTCGCCATGTTCCGCCGCTCCTTCTA CCGTCCCAGCCGGCTGATGGAAGTACCCTTCTCGCCGCTTTACGTAGGCGCCAGCATCTGCGTGGTCGGCGCCTCGGTCTGGCTGCTGCTGTTCGCCAAC CAGGACGTGCATTACAGCAACCAGCTCTGGTGGCAGTTCGCCCTGGACGCCGACGCCCCGCGCGCCCTGCGCGCCGCCCTCGGCAGTTGCCTGCTGCTCC TGGCCCTGGCCCTTGGCTGGCTGCTGCGCGCGGCACCGCCGGCGATCCGCGAGCCGAACGCGGAAGAGCTGCAGCGCGCGGCGCGGATCATCCGCCACTC GGACCAGCCGGATGGCGGCCTGGCCCTGACCGGCGACAAGGCCCTGCTCTTCCATGAGGGCGACGACGCTTTCCTCATGTACGCCCGCCGCGGTCGCAGC ATGATCGCCCTGTACGACCCGATCGGCCCGGCCATGCAGCGCGCCGAACTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCATGCCCGCCCGGTGT TCTACCAGGTGCGTGCCGAGAACCTGCCGTTCTACATGGACATTGGCCTGACCGCCCTCAAGCTCGGCGAAGAAGCGCGAGTCGACCTGCTGCGCTTCGA CCTGGAGAACAAGGGCAAGGAAATGAAAGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGGCCCTGGAGTTCCATGAACCGGGCCAGGCT CCGCTGGACGAGCTGAAGGCGATATCGGACGCCTGGCTGGGCGGCAAGCAGGTGCGCGAGAAAGGCTTCTCCCTGGGCCGCTTCACCCCGGCGTACCTGA ACTTCTTCCGCATCGCCATCGTCCGCCACCAGGGCAAGCCGGTGGCCTTCGCCAACCTGCTGGAGACCGACAGCCGCGAACTGGCGAGCCTCGACCTGAT GCGCGTGCACCCGGACGCGCCGAAGCTGACCATGGAGTTCCTCATGCTCGGCCTCATCCTCCACTACAAGGCCCAGGGCCACGCGCGCTTCAGCCTCGGC ATGGTGCCGCTGGCCGGGCTCCAGCCAAGGCGCGGCGCGCCGTTGACCCAGCGCCTGGGCGCGCTGGTCTTCCGGCGGGGCGAACAGTTCTACAATTTCC AGGGGCTGCGACGCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGCTACCTGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCCCTGGCCGATAC CGCCGCGCTGATCGCCGGCGGCCTGACTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTCTGTCGTGAAACGTCACTGGCGCCGTTTTCTGGTCGCCGCCCTGGTGCTGATCGTCGGTGCCGCCCTGCTGCTCTGGAGCCGACCGGCGGCCCAG GCGAAACTGGAAGCCCTGGACCTCGACGACGGCGGCCACGCCACCCTTGCCGAACCCGGCGAGAAGCCGCGCTCGCGGGTGGTGGTGATCGCCGCCCCCG AACAGCAATTGAACGACGCCCAGATGCTGAACCTGGCTCACGACAGCGCCGCCCGGGTGATCCAGTACTTCCCTCCGGAAAACGGCGATTGCAGGGCGCA GCAGTCCCGGCTCGAAGCGGTCATTGCCCGCCTCGGCGGCAAGCCGAACCTGGTCGCCGGCATCGGCCCGGGCTCGACCACCGCCTGGCGCTGGCTCGCC AGCCAGGACGACGACAAGGCCAAGGCGCTCTCGGTCGGCTTCGACATTGCCCTGGCCGAGCGCGACTGCGACGCCCCGCTGCCGCACCAGGCGTCGCACG
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| Amino Acid Sequence |
>membrane protein
MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLLFGLALVACYHLLREIDPGALHDAIADVPRPALLGALGATALGFVILLGYEWSASRF AGVTLPMRSLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSLGCALPVLAALAALCDLDDAASALHLPRALVAVIAIAVLSL AVGLVAFLARHRLPGERPSPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYLLALAAGVLSHVPGGVGVFEAVLLA AFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLLLFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIPHRLIDASH LVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEASLLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFAN QDVHYSNQLWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRHSDQPDGGLALTGDKALLFHEGDDAFLMYARRGRS MIALYDPIGPAMQRAELIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTWNRGQRDGLALEFHEPGQA PLDELKAISDAWLGGKQVREKGFSLGRFTPAYLNFFRIAIVRHQGKPVAFANLLETDSRELASLDLMRVHPDAPKLTMEFLMLGLILHYKAQGHARFSLG MVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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