Pseudomonas aeruginosa BWH052, V553_02366
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTCGATGGCCACCAAGCAACTCTCGCAGAAGGGCGGAGCGGTGCTCCTGGAGCCGGTGATGAAGGTCGAGGTGGTGACCCCGGAGGACTACATGGG CGACGTGATGGGCGACCTCAACCGCCGGCGTGGCCTGATCCAGGGCATGGAGGATACCCCGGCGGGGAAGGTGATCCGTGCCGAGGTCCCGCTGGGCGAA ATGTTCGGCTATGCCACCGACGTGCGCTCGATGTCCCAGGGGCGCGCGAGCTACTCGATGGAGTTCGTCCGCTATGCCGAGGTACCGGCCAGCGTGGCCG AGGCGATCGTCGCCAGGCAGGGCCGCTGAGAGCCGCCGCGCGCCGCCGAGGCCAGCGGCGGCGCGCGCCTTTGCGGGAGCGGCAGCCGCATCTTCGGCGC CGATGCGCTTGCCAAGCGGGGTTTTTGACGCCCCCTGGATGCTTAACTATAAGACAGTGACCAAGGCCCGCACCTATACGGTCACAAGGATGGCGAATCG
|
|
| DNA Sequence for Gene |
>V553_02366
ATGCTTGCTTCAGCGATTGCCAGCGGTACCGCAGTCTCCCAGGTCTCCAAGCATCTCCTAATGTTCCTGGCCGCCCTTTTCCTCGCCCTCGGTGCATGCG GCTGGGCGATCCTGCACATCGCCAGGCACCAGGACGACATCGCCATCGAGCAGAGCCATTTCTACGTGGAAAAGGCGCTGCAGAATCGCCGGGAAAATTC CGAGCAGTTCTCCACCACCTATTCCTTCTGGACCGATGCTTACGTCTATCTGGGAAACCGGGTCGATGTGGACTGGGCCTTCACCAAGAACAACCTCGGC TCGGTGCTCTACACCACCAACGGCTACGACGGCGTCTTCGTCATCGACGACCGTGGCACTCGCTACGCCATGCTCGAGGGCGAGCTTTCCGAACGCTCGC TGGCCGACTCGCTGAACGCCGACACCGGGGACATCCTCCGCTCCGCACGCCGTGCCGCGGTGGACGAAGCGGCGATCAGCCGCTACGTCGACTTCGACGG CGCACCGGCGATCCTGGTCGCCTCGGCGATCAAGCCCACCAGCGATCATGCGCCCATCGACCTGGCCAAGGCCTCGGTGATGGTCTTCGTCGACCGGCTG ACCCCGGCGAAGCTGGCCAAGCTCGGCGGCGACTACGGCATCGCCAACCTGCACCTGCTGGCCGGCGGCGCGGCGGGCGACAAGGAAAGCCTTGCCCTGG AGGGCACTCCCCATCGCCTGGCCTGGGTGTCGTCGCGTCCGGGTAGCGCCATGCTGCGGGAGACCGCGTTGCCGCTGCTGGGAATCTTCGTGCTCGCCGC CGGGCTGCTGTTCTGGCTGAGCCGCAGCGCCGTGCTCAACGCCCGCGCGGTGGATCGCCAGCAGAAGGTCCTGAAACGCAGCAACCAGGCCCTGCTGGCC AGCGAGGAACGTTTCAAGTCGATAGCCGAGGCGGCCTCGGACTGGATCTGGGAAGTCGACGGGCATTTCGTCTTCACCTATCTCTCCGTGCGCTTCCGCG ACGTCACCGGCTACCAGCCGGAGGCCTGGATCGGGCGGCGGCTGGACGAGTTGCTGGATAGCGATACGGTGAACATCGTCAAGTGGCTGGAAGGGCTGCC CGATGCCGGTGCGCCGTCCAGCCTGGTCTGCGCTTTCCGCGACAGCCAGGGCCAGGCGCGGGTCGGCAAGCTGAGCGCCAGCGCGATCCGCAACGGCGTC GCCAGCGGCTATCGCGGCACGGCGGCCGACATCACCGACGAGGTCGAAGCCCATGCGAAGATCCAGCATCTGTCCCTGCACGATGCCCTGACCGGCCTGC CGAACCGCAACAAGCTGTTCCAGTTCCTCGAACGCCTGCTGGCGGAAAAGGCTGGCAAGTCGCCGGTAGCGGTACTGATGCTCGACCTCGACCGCTTCAA GCCGATCAACGACCAGCACGGCCATCCCGCCGGCGATGCGGTGCTCTACGCCATCGCCGAACGGCTGCGCGCCTCGACCCGCGACCAGGACATGGTTGCC CGGCTCGGCGGCGACGAGTTCGTGGTGGTCAGTACCCACGTGTCGTCGAAGCTGGAAATCGAGAAGTTCTGTAGCCGGCTGATCGACGTGATCAACCGCG AGGTCGCCTACGAAGGGCACAGCTTCCATGTCGGCGCCAGCATCGGCGTGGCCCTGGCGCCGGAGCACGGCGGCGATCCGCGGGGCCTGCTGCGTTGCGC CGACGTGGCGATGTACGAGGCCAAGGCCGCGGGGCGCAATACCTGGCGTTTCTACTTGGAAGCGATGGACTCCCATCTCGCCGAGAAGAAGCTGCGCGAG ACCGAGTTGCGCGCCGCCTTGCAGAACGGCGAGTTCGAGTTGTACTACCAGCCGCGTTTCCTGGCGCAGGAACAGACGATCGCCTCGGCGGAGGCGTTGA TCCGCTGGAACCATCCGCGCCGCGGGCTGATCGGCCCGGACGAGTTCATCGGCCTGGCGGAAGAAAGCGACCTGATCGTGCAGATCGGCAACTGGGTGCT GCGCGAGGCCTGCGCCACCGCCGCCAGCTGGCCAGGCGAGGTGATGGTCTCGGTGAACGTGTCGCCGGCGCAGTTCATGACCGGCGATATCGTCTGGCAG GTGCGCGAGGCCCTGCGCCTGGCCCGCCTGGATGCTCGCCGGCTGGAGCTGGAGGTGACCGAGAACGTCATGCTCAACGATGTCGATGGCGCGCTGCGGA CCATGACGGCCCTCAAGGAGCTGGGCGTCCGCCTCAACATGGACGACTTCGGTACCGGCTATTCCTCGCTCGGCTACCTGCGCACCTATCCCTTCGACAG CATCAAGATCGACAAGCGCTTCGTCGCCAGCATGGAGAAGACCGGGCGCGACCGTTCGATCGTGCAGGCCATCATCAATCTCGGCAACGCCCTGAACCTG CGGGTCACCGCCGAGGGCGTGGAGACCGAAGGGCAGATGCACATCCTGCGCGACGAGCAATGCCACGAACTGCAAGGGTTCCTGCTCAGCCGACCGCTGG ATGCGCAGCGCCTGCGCGATCTGCTGGAGCGCGAGGCGGGGCAGACCCAGGCGCCCCAGGTTTCCGCCGAAGGCCATGCTGCGCGCCGGCCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGGCGTCAGAAGGGCGCACGCGGTGCCTCGGCGACCCTCGGTTCAGCGATCGCCCTGCGTATGGTTCAGAAAATGCTGAACTGATTATTTGACCTGAC TGATTCCCTTCCCGTCTTCGCTTGCCGACACTCCGTCCTTCCCATGGCCTTGTGCCAGGGCCGCCGGCCGGAATGTCTGCTTCCGGCGAGCGATAACAAG AATGACGAGGAAGCCGCATGAGCAATAACAACGAGGCGTCACGCCCGAAGATCGAAGTGCGTTCGATCGATTACGTTCCCCGCCACGAGCGTCACGGCAA GGTCTGGCACCAGGCGCCGTTCTGGTTCACCGGCAATTTCGTACTCACCACCATGGTCACCGGCTTCACCGGGCCGGCCCTCGGCCTGGGGGCGCTGTAC TCGATCCTGGCGATCGTCCTCGGCGTCTGCTTCGGCACCTTCTTCATGGCCTTCCATGCCAACCAGGGCCCGCGCATGGGCTTGCCGCAGATGATCCAGT
|
|
| Amino Acid Sequence |
>histidine kinase
MLASAIASGTAVSQVSKHLLMFLAALFLALGACGWAILHIARHQDDIAIEQSHFYVEKALQNRRENSEQFSTTYSFWTDAYVYLGNRVDVDWAFTKNNLG SVLYTTNGYDGVFVIDDRGTRYAMLEGELSERSLADSLNADTGDILRSARRAAVDEAAISRYVDFDGAPAILVASAIKPTSDHAPIDLAKASVMVFVDRL TPAKLAKLGGDYGIANLHLLAGGAAGDKESLALEGTPHRLAWVSSRPGSAMLRETALPLLGIFVLAAGLLFWLSRSAVLNARAVDRQQKVLKRSNQALLA SEERFKSIAEAASDWIWEVDGHFVFTYLSVRFRDVTGYQPEAWIGRRLDELLDSDTVNIVKWLEGLPDAGAPSSLVCAFRDSQGQARVGKLSASAIRNGV ASGYRGTAADITDEVEAHAKIQHLSLHDALTGLPNRNKLFQFLERLLAEKAGKSPVAVLMLDLDRFKPINDQHGHPAGDAVLYAIAERLRASTRDQDMVA RLGGDEFVVVSTHVSSKLEIEKFCSRLIDVINREVAYEGHSFHVGASIGVALAPEHGGDPRGLLRCADVAMYEAKAAGRNTWRFYLEAMDSHLAEKKLRE TELRAALQNGEFELYYQPRFLAQEQTIASAEALIRWNHPRRGLIGPDEFIGLAEESDLIVQIGNWVLREACATAASWPGEVMVSVNVSPAQFMTGDIVWQ VREALRLARLDARRLELEVTENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVASMEKTGRDRSIVQAIINLGNALNL RVTAEGVETEGQMHILRDEQCHELQGFLLSRPLDAQRLRDLLEREAGQTQAPQVSAEGHAARRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|