Pseudomonas aeruginosa BWH052, V553_00285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAGCGGTTCTTCGGCGGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCG CTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCACGCTGTTCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGGCGATC GATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGACACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGT CGCCCTACCGTTGTCTTTTTGTAGCGCGCCACCGGTCGCGCGCACGAGTCCTCCCGAAGGCTGCCCCGGGAGCTTCGCGCAGCCCCCTCCAGGCCCCGTC CGGCCAGGGCTGGAGGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAACATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCC
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| DNA Sequence for Gene |
>V553_00285
GTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGCAGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGA AAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACCGCGCCCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGA AAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGGCAAAGAAGGCCGGGACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAG CCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCAAGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCA TCCATGACCTCGGCTTCCCCTACTGCACCCCGATCCAGGCGCAGGTACTGGGCTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCACAGACCGGCAC CGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAATTGCTGCAGACCCCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATC GCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGACCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACT TCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGCCACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCT GGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAG GGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGAACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGC CGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGGCAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCACAGAACAACTG GGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAGGAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGAC GTACCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGATCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCG ACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAGGACCCGGACGACTACGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTC GATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAACTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTC AAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCTT GCCCGGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGGGTCAAGACTTCGCCCTACATCGTCCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRPPRADNESGAPRAAEKAEKGEKPAKPAGKEGRDAKPRSDKPRRERKPK PVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALII APTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK GERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGD VPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELL KPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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