Pseudomonas aeruginosa BWH051, V552_03885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH051 adTzG-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGTCGGCCTGTTTGCCGTGGCGGGCAGCGCATTCGCCGCCAAGCCCTGTGAGGAACTGAAAGCCGAGATCGATGCGAAGATCAAGGCCAACGGCGTTC CTGCCTACACCCTGGAAATCGTCGACAAGGGCAGCGTCACCGACAAGAAGGTAGTCGGCACCTGCGACGGCGGCACCAAGGAAATCGTCTACCAGCGCGG CTGATGCAGCGCCTGCGACGAGCAGTATCCGGGGCCGGCTTTCCCATGGGAGCCGGCCCTTTCTTTTTGCCGCGATGAGTACCCTGCCAACGATGGGTCT TGTTGCAGTTCGTCGAGAAAGCGTGCCATCTAACGGATTAATCCAAAAGTCTGTGTTAGGTTTTTCGGCACGCCCAGATGGCCTTGTGCCTTAATTCCGG ATTGTCCGACTCATGGAAGACGGATTTCGGAATATTCCTGCTTACCCGCTGTAGCCGCTGGGCCAACATCGCGCCTTTCTGTATTTCAAGGAATGAAATC
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| DNA Sequence for Gene |
>V552_03885
GTGGCTCTCCATCGCCTGGCCTTTATCTTCCTGTGCCTGCCGCTCATGGCCAGCGCCGCCCCCTTCACCTCCCCCGGTGACCGCGACCTGATCCGCGACC GCCAGCAGCGCCTGCTGGACGAACAGCGCAAGCGCCTGGAGGAACTCCAGCAACTGCCCGGCAAGGGAGCGCCCGCCGCTGCGGATGCCTCCGGCGACGA CGAGCGCTGCTTCGAGATCCGCCGCATCGAGCTGGAAGGCGCCGGGCACCTCGACGAAAGCGCGCGTCGCCAACTGCTGGCGCCCTACCAGGGGCGCTGC CTGGGCGTCGGCCAGCTCAATGCGCTGCTCAAGGCTGTCACCGACCATTACCTGGATCGCGGCTACGTCACCACCCGTGCCTACCTGCCACAGCAGGACC TGGCCTCCGGGACCCTGCGCATCATCGTCGTCGAAGGCCGCCTGGAGGGCCTGGACAGCTCCGCGCTGGCCAGCCCGCGCGAACTGGCGATGAGCTTTCC GGGCAGGACCGGCGAGCTGCTCGACCTGCGCGAGCTGGAGCAACTGGTCGACCAGTTGAGCCGCCTGCCGTCGCGCCAGGTGCAACTGGAGCTGGTGCCC GGCAGCGAGGTCGGCGGCAGCCGGGTGCGTCTCAAGGGCGAGCGCGACAAGCCCTGGCGGGTCTCCGCCACGCGCAACAACGACGGCGACGTCAGCACCG GCGAGCAGCAGATGGGCCTGGGCCTGGACTGGGACAGCCCGCTGGGCCTGGCCGACCAGCTCAACCTGCGCGCCAACCGCGACGCGGTGACCGACCGCTG GCGCCATTCCGACAGCCAGAGCCTGTTCTACAGCCTGCCCTGGGGCTGGTGGACCTTCACCTACGGCTACAGCCAGAGCGACTACCGCACGCGCAACGAG GCCAGCGGCTTCCCCTTCAAGCTCGATGGCGACAGCCGCAGCCATCAGTTCCGCGCCGAACGCGTGCTGCACCGCGACGGCGTGAGCAAGACCGCCATGA GCCTGGGGCTCAGCCACCAGCGCACCAACAACTATGTCGAAGACACCCGCCTGGAAGACCAGAGCACGCGGATCACCGAGACCCAGCTCGGCTTCAACCA CGGCCGGCGGATCGGCAGCGGTTTCGTCAACCTCGACCTCGGCTGGCAGCAGGGCATCGGCGCCCTTGGCGCGCAGGGTCGCGGCCACCCGCACGCGGGC GATCCGCATGCGCGCTACGACAAGTACAGCCTGACCCTCAGCTACCTGCAGCCGTTCCAGCTATGGGGCGAGCGCTTCAGCTTCGACAGCCTGGCCACCG GGCAGAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAG CGGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAGTGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGAC GTCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCA GCGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGACGCGGCGACCTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTTGCTTAACCTCGCCGGGCCCCTACCCGCCA AGGAGTAACGATATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCCTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGG GGCTGGCGCTGGACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCATCGTCAATATCGCCACGCCCAACGGCGCCGGGCT GTCGAACAACCATTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCCACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATC CTCGGCAACCCCAACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACCGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCG
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| Amino Acid Sequence |
>hemolysin activation/secretion protein
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLDESARRQLLAPYQGRC LGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQVQLELVP GSEVGGSRVRLKGERDKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNE ASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPHAG DPHARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYD VGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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