Pseudomonas aeruginosa BWH051, V552_02981
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH051 adTzG-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCAGGTGCGGCGAGCACGGCCAGCAGGCTGAGGATGAGATAGCGCATGTGGACTCCAGGCGGCCGTCGCCAGGGAAGGAAGGCAAGACGTGACGGCTT GCGCCTCGCAGCGTGAATTCTGCTGAACCCGGCCTGAATCGGGCCTGAACGAAGCCTGAACAATTTCTGAACGAACCGTCAGAAAACCCCGGAATGGCTC AAGAACGGACCTCGGCGAAACGTTCGGAAAACCGAACGCCATGCCCCGAAAATATTCGGAAGAGCGGACGAAAGGCCATTTCGGGGCATTTTCATCCAAA TTTAATTTCTTTTACTTTCAAACGGTTAGGCTAAAAAAAACCGGATTTCATAAGCTGGCATGCATCCTGCCACTACACTGTTCGGCAAGCACGATACTCT CGTGGCTTCCCCCGCCGGGGAAAACCGCGAAACACCCTGTCCCGGAGAGGCCAGGCGCTCGCGGCTCAATAAAAATCAAAACAAGTCGAGGAAGAAATTC
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| DNA Sequence for Gene |
>V552_02981
ATGCGTATCGCTCCCAGTCTGCTGAGCACCGCCATCGTGGCCGCTCTGTTGTCCGCTCCGGTCGTCGCTGACGAGCTCACCGGCACGCTGAAGAAGATCA AGGAAACCGGCACCATCACCCTCGGTCACCGTGACGCTTCGATTCCCTTCTCCTACCTCGGCACCGAGCCGGGCAAGCCGATCGGCTACTCCCACGACCT GCAACTGAAAGTGGTCGAGGCGGTGAAGAAGGAACTCAACCTCCCCGAGCTGAAGGTCCGCTATAACCTGGTCACCTCGCAGACCCGCATCCCGCTGGTG CAGAACGGCACCGTGGACATCGAGTGCGGCTCCACCACCAACAACGAAGAGCGCCAGAAGCAGGTCGACTTCTCCGTCGGCATCTTCGAGGTCGGCACCC GCCTGCTGTCGAAGAAGACCGCCAACATCAAGGACTTCGACGACCTCAAGGGCAAGAACGTGGTGACCACCGCCGGCACCACCTCCGAGCGCCTGCTCAA GGCCATGAACGCGGACAAGAAGATGGGCATGAACATCATCTCCGCCAAGGACCACGGCGAGTCCTTCATGATGCTCGAATCCGGCCGCGCGGTGGCCTTC ATGATGGACGACGCGCTGCTCTACGGCGAAATGGCCAAGGCCAAGAAGCCGGACGACTGGGTCGTCGGCGGCACCCCGCAGTCCTTCGAGATCTACGGCT GCATGGTGCGCAAGGGCGACGCGGCGTTCAAGAAAGTGGTCGACAAGGCCATCACCGATACCTACGCCTCCGGCGAGGTCAACAAGATCTACGACAAGTG GTTCACCCAGCCGATCCCGCCGAAGGGCCTGAACCTCAACTTCCCCATGAGCGAAGAGCTGAAGAAGCTGATCGCCAGCCCGACCGACAAGGCCGCCGAG CAGATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAGCGCCTGGCGTTCCTCCCGGAGCGCCAGCGCTTCGCGCGTCGCCCCCGCCTCGCGGCGGGGCCTCGGGGACGCGGGAGGGGCCTGCCCCTCCCCAGC CGTCTCCCCCGGAAGAGCAGCGCCGCCGGCCCGCACGGCCGCGCCGGCGCCTGCCTTCCCCGCCAGTGTCTGCAACCGATTGAACCGAGGGGAAACCCCA ACATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGGATCGGCAGCGAAACCTACCTCGACTGGTACATCGCCGGTCTGGGCTGGACCAT CGCCATCGCCCTGGTCGGCTGGATCATCGCCCTGGCGCTGGGCTCGCTGCTCGGCGTCATGCGCACCGTGCCGAACCGCCTGGTATCGGGGATCGCCACC GCCTACGTGGAAATCTTCCGCAACGTGCCGCTGCTGGTGCAGCTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCCGAGGGCCTGCAGACCTGGT
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| Amino Acid Sequence |
>ABC transporter
MRIAPSLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSHDLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLV QNGTVDIECGSTTNNEERQKQVDFSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKDHGESFMMLESGRAVAF MMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFKKVVDKAITDTYASGEVNKIYDKWFTQPIPPKGLNLNFPMSEELKKLIASPTDKAAE QM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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