Pseudomonas aeruginosa BWH051, V552_01492
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH051 adTzG-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCAGCAAGATCGACTCGCGCACCATCCTCGACCAGGGTGGCGCCGAACAGCTTCTCGGCCACGGCGACATGCTCTACCTGCCGCCGGGCACAGGCCTG CCGATTCGCGTGCACGGCGCCTTCGTTTCCGACGACGAGGTGCACCGGGTGGTCGAGGCCTGGAAGCTGCGCGGCGCGCCCGACTACATCGAGGACATCC TCGCTGGCGTCGACGAAGGCGGCAGCGGTGGCGGTTCCTTCGATGGCGGCGACGGCTCCGGCGAAGGCAGCGAGGACGACCCGCTCTACGACGAGGCGGT ACGTTTCGTCACCGAGAGTCGCCGGGCATCGATCTCCGCCGTGCAACGCAAGCTGAAGATCGGCTACAACCGCGCCGCGCGGATGATCGAGGCGATGGAG ATGGCCGGCGTGGTCACCCCGATGAATACCAACGGCTCCCGCGAAGTCATCGCGCCGGCGCCGGTTCGTGATTGAACCCGACAGGTTTTAGAGGATTCCG
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| DNA Sequence for Gene |
>V552_01492
ATGCGACTGATCCGCACGTTGTTCGTTGCCGCCCTGGCCATGGGCGCTTCGCTGGCCCATGCCGACGACAGCGCCGCTGTCCAGCGCCTGACCGGCCTGC TGAACAAGGCCCAGACCCTGACCGCGCGTTTTTCCCAACTGACCCTGGACGGTAGCGGCACGCGCCTGCAGGAAACCGCCGGCCAACTGAGCCTGAAGCG GCCGGGACTGTTCCGCTGGCATACCGATGCGCCGAACGAGCAATTGCTCATTTCCAACGGCGAGAAGGTCTGGCTGTACGACCCGGACCTGGAGCAGGTG ACCATCCAGAAGCTCGATCAGCGCCTGACCCAGACGCCGGCGCTGCTGCTCTCCGGCGACATCTCGAAGATCAGCGAAAGCTTCGCCATCACCTACAAGG AGGGCGGCAACGTAGTCGATTTCGTGCTCAAGCCGAAGACCAAGGACACCCTCTTCGACACCTTGCGCCTGTCGTTCCGCAGCGGCAAGGTGAACGACAT GCAGATGATCGATGGCGTCGGCCAGCGCACCAACATCCTGTTCTTCGACGTGAAGATGAACGAGGCGCTGGATGCCAAGCAATTCACCTTCGACGTTCCG CCGGGCGTCGACGTGATCCAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCAAGCCGTGGATCTGTTCCGCAGCGAGCCCGTCGCGCAGCCCCTGGCGGCACGGCTGAGGCCCGCAAACCTGGACGAGTACGTGGGGCAGGAACACC TGCTGGCCCGCGGCAAGCCCTTGCGCGAGGCGCTGGAGCAGGGCGCGCTGCACTCGATGATCTTCTGGGGCCCGCCGGGAGTCGGCAAGACTACCCTGGC GCGGCTGCTGGCGCAGGTGTCGGACGCCCATTTCGAGACCATTTCCGCGGTGCTGTCCGGGGTCAAGGAGATCCGCCAGGCGGTCGAGGTGGCCAAGCAG CACGCGGCGCAATACGGGCGCCGGACCATCCTGTTCGTCGATGAGGTGCACCGCTTCAACAAGAGCCAGCAGGATGCCTTCCTGCCCTATGTGGAAGACG GCACGCTGATCTTCATTGGCGCGACCACCGAGAACCCGTCCTTCGAGTTGAACAATGCGCTGCTCTCGCGGGCTCGCGTGTATGTCCTCAAGAGCCTCGA
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| Amino Acid Sequence |
>membrane protein
MRLIRTLFVAALAMGASLAHADDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQV TIQKLDQRLTQTPALLLSGDISKISESFAITYKEGGNVVDFVLKPKTKDTLFDTLRLSFRSGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTFDVP PGVDVIQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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